H3W35AFXY_n02_adr3wtzt14s82.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n02_adr3wtzt14s82.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	207992
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	569	0.27356821416208316	No Hit
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATT	360	0.17308358013769762	No Hit
CCTTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT	284	0.13654371321973924	No Hit
GTCTTGTACCGACGACAGATCTTTCAAATGTCTGCCCTATCAACTTTTGA	282	0.1355821377745298	No Hit
GTTATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACACACGA	280	0.13462056232932035	No Hit
GTCTTACGACGGTCCAAGAATTTCACCTCTCGCGTCGTAATACTAATGCC	258	0.1240432324320166	No Hit
GTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCT	257	0.1235624447094119	No Hit
GTACAAGACCATACGATCTGCATGTTATCTAGAGTTCAACCAATATAACG	248	0.11923535520596945	No Hit
GTATAGTACTAACCACAATTGTAAGTTGTACTACCCGTATGAAGCACAAG	237	0.11394669025731759	No Hit
GTACTATTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCC	217	0.10433093580522326	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATAGAT	15	0.0022223357	70.0	3
CGTATAC	30	5.86824E-4	46.666664	26
ATATCTT	30	5.86824E-4	46.666664	2
TACTATA	40	4.581771E-5	43.75	2
ACTATAC	35	0.001253399	40.0	3
GATATCT	45	9.1759204E-5	38.88889	1
ATCTGTG	85	2.557499E-9	37.058823	7
TTCCGAT	1675	0.0	35.104477	2
TTAATAC	50	1.7056789E-4	35.000004	3
AACGTCA	40	0.0024148945	35.0	28
GTCAAAA	40	0.0024148945	35.0	31
GCATAGG	40	0.0024148945	35.0	1
GATCTGG	430	0.0	34.186047	6
ATCTGGG	155	0.0	33.870968	7
CTTCCGA	1740	0.0	33.793106	1
TCCGATC	1740	0.0	33.793106	3
CCGATCT	1710	0.0	33.77193	4
TTCTGGT	75	1.4840662E-6	32.666668	20
CGATCTG	960	0.0	32.447914	5
TTTTGAC	55	2.98509E-4	31.81818	17