H3W35AFXY_n02_adr3wtzt14s70.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n02_adr3wtzt14s70.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	158691
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	858	0.5406733841238633	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	210	0.13233264646388265	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	194	0.12225015911425348	No Hit
GACGTAATCAATGCGAGTTAATGACTCACACTTACTGGGAATTCCAAGTT	175	0.11027720538656888	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	172	0.1083867390085134	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	165	0.10397565079305064	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATCCCA	15	0.0022218374	69.99622	50
TGGGGAT	25	2.3816607E-4	56.01463	14
CTATGAC	20	0.006933882	52.513714	3
GTCTCCT	20	0.006933882	52.513714	15
TAAGGGT	20	0.006933882	52.513714	5
AGTGGTC	20	0.0069425344	52.497166	8
GTATAGT	40	4.5697747E-5	43.76143	1
GAGGACA	35	0.0012528332	39.997837	26
ACATGTT	35	0.0012528332	39.997837	30
TACTAAC	45	9.169E-5	38.886787	7
TCCGTAT	40	0.002410082	35.009144	2
TATAGTA	50	1.7012424E-4	35.009144	2
TTCGGAA	50	1.7012424E-4	35.009144	2
CCTGTTT	40	0.0024138135	34.99811	8
ATGTTGT	50	1.7043999E-4	34.99811	32
CTAACCA	75	1.4817506E-6	32.6649	9
AGTACTA	55	2.9773515E-4	31.826492	5
TGTTGTT	55	2.982866E-4	31.816462	33
GTACTAA	55	2.982866E-4	31.816462	6
CCAAACA	45	0.0042918916	31.119238	4