H3W35AFXY_n02_adr3wtzt14s6.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n02_adr3wtzt14s6.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	226985
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	917	0.4039914531797255	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	876	0.38592858558935617	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	789	0.34760006167808444	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	784	0.3453972729475516	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	608	0.26785910963279513	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	416	0.1832720223803335	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	408	0.17974756041148093	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATT	238	0.10485274357336388	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAGATA	20	7.911354E-5	70.006386	70
AGTGCGT	20	0.006948431	52.49323	8
TTCGGAA	45	9.185554E-5	38.88387	2
TTTCGGA	40	0.0024142757	35.003193	1
ATGGTTG	80	6.22058E-8	34.995483	14
GGTAACG	85	1.0577605E-7	32.944183	26
AACGGGT	90	1.7434104E-7	31.120808	22
ATCCAAC	45	0.0042993263	31.11395	58
GGTACAA	80	2.45535E-6	30.627794	57
GTCCTAG	95	2.8055E-7	29.476376	1
GGTTGCA	95	2.8055E-7	29.476376	16
GAATCAG	95	2.8109207E-7	29.469881	35
TCGATTC	95	2.8109207E-7	29.469881	45
GGGTTCG	95	2.8109207E-7	29.469881	41
TCAGAAC	60	4.969189E-4	29.169329	61
AGGACTA	110	3.165769E-8	28.63267	5
AGACCAT	100	4.3948057E-7	28.002558	63
ATAAGGT	50	0.007195161	28.002558	69
AGGGTTC	100	4.4032822E-7	27.996386	40
CAGGGTT	100	4.4032822E-7	27.996386	39