H3W35AFXY_n02_adr3wtzt14s60.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n02_adr3wtzt14s60.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	273704
Sequences flagged as poor quality	0
Sequence length	76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1343	0.4906760588080554	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	495	0.18085230760237336	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	433	0.15820009937742963	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	375	0.13700932394119195	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	338	0.123491070645661	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	290	0.10595387718118844	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATATCAG	30	5.873174E-4	46.66399	68
TAGTTCA	40	4.5871457E-5	43.747486	5
CCTCACA	45	9.186643E-5	38.886654	2
AAACACG	70	8.67165E-7	34.997993	15
GTGTACC	40	0.0024169057	34.99799	18
TGGGACT	110	3.1628588E-8	28.63995	34
GTATTTG	50	0.0072029443	27.998392	1
TGGACGT	100	4.4061198E-7	27.998392	26
ACTCTGC	115	4.8785296E-8	27.389734	8
ACACAGC	105	6.748396E-7	26.665134	1
CTGCAAA	105	6.748396E-7	26.665134	11
ACGAATG	70	0.0012232735	25.003134	45
ATCTAGT	85	1.3059721E-4	24.704464	7
GCACTCT	115	1.4916222E-6	24.34643	6
AACACGA	115	1.4916222E-6	24.34643	16
TGGCGTA	90	1.9220203E-4	23.336256	50
AGTTCCG	90	1.9220203E-4	23.336256	32
AGCACTC	120	2.15999E-6	23.331995	5
CGTATAG	105	2.0341815E-5	23.331993	30
AGTGGAC	105	2.0341815E-5	23.331993	24