H3W35AFXY_n02_adr3wtzt14s45.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n02_adr3wtzt14s45.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	144418
Sequences flagged as poor quality	0
Sequence length	76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	362	0.25066127491032975	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	271	0.18764973895220816	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	198	0.13710202329349527	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	195	0.1350247199102605	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	194	0.13433228544918224	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	178	0.12325333407193009	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	175	0.12117603068869533	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACCATT	15	0.002221784	69.99342	6
ATTATCG	25	2.3851253E-4	55.99474	65
TAAGACA	20	0.0069328686	52.51325	4
ACCTACC	20	0.0069423746	52.495068	49
CATTATC	30	5.864963E-4	46.66228	64
ATACGTG	40	4.577316E-5	43.74589	67
ATTACGA	35	0.0012527055	39.99624	69
CACCCAT	35	0.0012527055	39.99624	60
AATATTA	55	6.647091E-6	38.191452	8
TATTAAC	65	4.821304E-7	37.70182	10
TTTCGGA	50	1.7005744E-4	35.00883	1
CTATACT	40	0.0024094712	35.00883	4
TTAACGT	40	0.0024094712	35.00883	13
TTTCACA	40	0.0024135706	34.99671	55
TACGTGT	50	1.7040427E-4	34.99671	68
ATTAACG	55	2.9761883E-4	31.826212	12
TTGCGCA	55	2.9761883E-4	31.826212	19
AGATCTA	45	0.0042980937	31.108185	68
GCTATTA	45	0.0042980937	31.108185	66
TTAGAAC	45	0.0042980937	31.108185	56