H3W35AFXY_n02_adr3wtzt14s37.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n02_adr3wtzt14s37.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	198492
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	717	0.3612236261411039	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	241	0.12141547266388569	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	215	0.1083167079781553	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	203	0.10227112427704894	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	200	0.10075972835177237	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCTTAG	20	0.0069436063	52.5	1
TATAGAG	35	0.0012532601	40.000004	5
AGAGACC	35	0.0012532601	40.000004	8
TGTAGGG	45	9.1744056E-5	38.88889	2
GTAGGGG	60	1.2114911E-5	35.0	3
CTGTAGG	55	2.9846013E-4	31.81818	1
TAAAGAA	55	2.9846013E-4	31.81818	5
TCAGTTA	45	0.004299959	31.111113	8
TAGGACT	80	2.4550482E-6	30.625	4
AGGACTA	70	3.47646E-5	30.000002	5
CTAGGAC	70	3.47646E-5	30.000002	3
TTTCGGA	95	2.804736E-7	29.473686	1
TTCGGAA	95	2.804736E-7	29.473686	2
TCTGTGG	85	3.9373335E-6	28.82353	8
CATATGT	50	0.007196229	27.999998	4
GAGTAGG	50	0.007196229	27.999998	1
AAGACTC	50	0.007196229	27.999998	4
TAGCAGA	50	0.007196229	27.999998	4
GACATTT	50	0.007196229	27.999998	35
GGATTCT	50	0.007196229	27.999998	6