H3W35AFXY_n02_adr3wtzt14s31.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n02_adr3wtzt14s31.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	107662
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	708	0.6576136426965875	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	156	0.14489792127212944	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	141	0.13096542884211698	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	129	0.11981943489810705	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	124	0.11517527075476956	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	113	0.1049581096394271	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
GACGTAATCAATGCGAGTTAATGACTCACACTTACTGGGAATTCCAAGTT	108	0.10031394549608962	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAACTAA	15	0.002219416	70.0	6
ACGTTAC	15	0.002219416	70.0	22
ATAAATA	15	0.002219416	70.0	2
GTGACCC	15	0.002219416	70.0	9
CTTTGCT	20	0.00693502	52.5	9
GTGAGTA	20	0.00693502	52.5	4
AATTAAT	20	0.00693502	52.5	1
TTTTGAC	20	0.00693502	52.5	17
TGAATCT	20	0.00693502	52.5	49
ACTATTA	30	5.8555586E-4	46.666664	3
TGCTTAA	30	5.8555586E-4	46.666664	27
GCTTCAA	30	5.8555586E-4	46.666664	39
TTTCGGA	40	4.5669763E-5	43.75	1
TTAATAC	35	0.0012507063	40.0	3
ATTACTT	35	0.0012507063	40.0	6
TTACTTT	35	0.0012507063	40.0	7
TATTACT	35	0.0012507063	40.0	5
GAACAAA	35	0.0012507063	40.0	14
CTCCACT	45	9.14644E-5	38.888885	28
AGTGCTT	45	9.14644E-5	38.888885	25