H3W35AFXY_n01_adr3wtzt14s95.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s95.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	293707
Sequences flagged as poor quality	0
Sequence length	76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	589	0.20053999393953836	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	559	0.19032573278811876	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	519	0.17670671791955928	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	392	0.13346634571188293	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	362	0.12325208456046331	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CTTATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGT	361	0.12291160918874934	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	337	0.11474020026761365	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGACT	20	0.006947045	52.499744	4
TTGTAAC	20	0.006947045	52.499744	3
CAATTAC	20	0.006947045	52.499744	38
TATTAGA	20	0.006947045	52.499744	2
ATAAACT	20	0.006947045	52.499744	51
GACTGCT	20	0.006947045	52.499744	7
TAGACTG	35	0.0012542729	39.999805	5
GTATTAA	40	0.0024125353	35.01175	1
TCATAGG	40	0.0024125353	35.01175	1
AGCCAAA	40	0.0024165697	34.99983	11
TCTAACA	55	2.9881558E-4	31.818027	2
ATTTACT	45	0.0043033934	31.110962	7
AATTTAC	45	0.0043033934	31.110962	6
CTGTAGT	45	0.0043033934	31.110962	4
TCTAGGG	45	0.0043033934	31.110962	8
TTTCGGA	125	1.03682396E-10	30.810339	1
TGCTTTA	60	4.975511E-4	29.166523	35
TTAATTT	50	0.007201939	27.999865	4
TTGTACG	50	0.007201939	27.999865	3
ACTAGGC	50	0.007201939	27.999865	35