H3W35AFXY_n01_adr3wtzt14s85.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s85.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	224589
Sequences flagged as poor quality	0
Sequence length	76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	640	0.2849649804754462	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	572	0.2546874512999301	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	532	0.2368771400202147	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	444	0.19769445520484083	No Hit
CTTATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCCGT	344	0.15316867700555237	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	244	0.10864289880626388	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	231	0.10285454764035638	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCTAGG	20	0.0069387634	52.511528	1
TGACACC	20	0.0069448785	52.499832	18
CTCGTAT	60	4.9112714E-9	46.666515	39
GCGAATC	35	0.0012536319	39.999874	67
TACATGG	35	0.0012536319	39.999874	2
TGTAAGT	35	0.0012536319	39.999874	4
TCGTATG	75	3.520654E-8	37.333218	40
GTACCGA	40	0.0024153418	34.99989	6
GTTTAGG	40	0.0024153418	34.99989	45
ACGGATT	40	0.0024153418	34.99989	16
GTATGCC	85	1.0585609E-7	32.94107	42
TCTAGCG	45	0.004301221	31.111012	8
CCGTCTT	95	2.807592E-7	29.473593	47
AAAGGGG	95	2.807592E-7	29.473593	68
TTTCGGA	60	4.965295E-4	29.173069	1
GCTTAGG	50	0.0071905004	28.006147	1
TCTTCTG	100	4.398098E-7	27.99991	50
TCTGTTA	50	0.0071983244	27.99991	27
GTCTTCT	100	4.398098E-7	27.99991	49
GCTCCTA	50	0.0071983244	27.99991	52