H3W35AFXY_n01_adr3wtzt14s7.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	74539
Sequences flagged as poor quality	0
Sequence length	76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	241	0.3233206777660017	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	226	0.30319698412911367	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	219	0.29380592709856584	No Hit
CTTATACACATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCGT	195	0.2616080172795449	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	153	0.20526167509625834	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	122	0.16367270824668964	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	119	0.15964796951931204	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTAGGC	15	0.0022181578	69.988594	2
CCTCTGA	15	0.0022181578	69.988594	65
GTCCTAA	20	0.006912745	52.52669	1
CGCATCT	20	0.0069311406	52.49144	24
CTCTGAC	20	0.0069311406	52.49144	66
AACACGA	20	0.0069311406	52.49144	11
TTTCGGA	50	1.6901371E-4	35.0178	1
TTCGGAA	60	4.944934E-4	29.161913	2
TCTGCCA	50	0.0071735503	27.995434	27
ATGCAGA	50	0.0071735503	27.995434	10
TCTCGCC	75	0.0018187886	23.329529	8
AGCACCC	80	0.0026465356	21.871433	5
GACACTC	690	0.0	21.300877	70
TAATCTC	100	3.890497E-4	20.996576	70
TAGACGT	120	5.6333818E-5	20.41334	25
ATCTCGA	105	5.40689E-4	19.996738	7
GTCTGGG	90	0.005236527	19.441275	2
GCACCCC	90	0.005236527	19.441275	6
ATCTGAC	90	0.005236527	19.441275	7
GGGACTG	110	7.395877E-4	19.087797	35