H3W35AFXY_n01_adr3wtzt14s79.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s79.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	147924
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCTCGTATGCCGT	260	0.17576593385792705	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	248	0.16765365998756118	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	208	0.14061274708634164	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	205	0.13858467861875015	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	171	0.11559990265271355	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	156	0.10545956031475623	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGATCA	20	0.0069401255	52.500004	20
TATACCA	20	0.0069401255	52.500004	5
TATGTGA	20	0.0069401255	52.500004	11
TTACATC	20	0.0069401255	52.500004	4
AGGTGTC	20	0.0069401255	52.500004	7
CTCGTAT	105	0.0	40.0	39
CATAGGA	35	0.0012522253	40.0	2
AAAGGTA	35	0.0012522253	40.0	5
GTATGCC	115	1.8189894E-12	36.521736	42
TCGTATG	115	1.8189894E-12	36.521736	40
TCTGAGC	40	0.0024126465	35.000004	8
ATCTGAG	80	6.188566E-8	35.000004	7
CGTATGC	120	1.8189894E-12	35.0	41
TGCTTGA	120	1.8189894E-12	35.0	55
CCGTCTT	125	3.6379788E-12	33.6	47
GTCTTCT	125	3.6379788E-12	33.6	49
TCTTCTG	130	5.456968E-12	32.307693	50
GCTTGAA	130	5.456968E-12	32.307693	56
GCCGTCT	130	5.456968E-12	32.307693	46
GCCGGGA	55	2.9809494E-4	31.81818	13