H3W35AFXY_n01_adr3wtzt14s75.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s75.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	225432
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAT	539	0.23909649029419072	No Hit
TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT	392	0.17388835657759324	No Hit
ATCACAAACATTTCAACTTCGCTGAGTCTCGGGAGGAGACAGTGTGGCCA	290	0.1286418964477093	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	282	0.125093154476738	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	279	0.12376237623762376	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	264	0.11710848504205258	No Hit
GTGCTGGAAGATTAATTGATGGGGTGCAAGCTCTTGATCGAAGTCCCAGT	245	0.10868022286099578	No Hit
GGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTA	239	0.1060186663827673	No Hit
GTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGG	231	0.10246992441179602	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTATTG	20	7.914819E-5	70.0	8
TCGCAAA	20	0.006944825	52.5	8
GGCCTTA	20	0.006944825	52.5	7
GTATTTG	30	5.869294E-4	46.666668	1
TCTAGTA	30	5.869294E-4	46.666668	8
CGTAATC	35	0.0012536227	40.0	20
TCTAGGG	50	1.7061329E-4	35.0	3
TCTGTCA	40	0.0024153234	35.0	8
CTCTGCG	40	0.0024153234	35.0	9
TATCTCG	140	0.0	32.5	70
TAATGCC	65	2.0965708E-5	32.307693	44
TCGTAAT	55	2.9858807E-4	31.81818	35
AGTGAGT	45	0.004301187	31.111113	2
TAATACT	60	4.9717404E-4	29.166668	38
ATCTAGT	60	4.9717404E-4	29.166668	7
CCGATTG	60	4.9717404E-4	29.166668	9
GGTCCAA	60	4.9717404E-4	29.166668	11
ACGCGGG	60	4.9717404E-4	29.166668	12
CTTAATA	75	5.568451E-5	28.000002	38
TTGGACT	50	0.0071982704	27.999998	4