H3W35AFXY_n01_adr3wtzt14s69.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s69.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	146673
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	410	0.2795333837857002	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	369	0.25158004540713014	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	337	0.22976280569702673	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	287	0.19567336864999013	No Hit
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATT	185	0.12613091707403543	No Hit
GTATAGTACTAACCACAATTGTAAGTTGTACTACCCGTATGAAGCACAAG	176	0.11999481840556886	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	158	0.10772262106863567	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
GTTATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACACACGA	153	0.10431367736393202	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTAAAAG	15	0.0022213687	69.99727	63
TTATAGT	25	2.3846001E-4	55.997818	13
TATTCGA	20	0.0069317203	52.51586	20
AGTTACC	20	0.0069317203	52.51586	17
AAAAGTC	20	0.0069410787	52.497955	65
ATTATTC	20	0.0069410787	52.497955	3
ATACGAC	20	0.0069410787	52.497955	3
GCTAATG	20	0.0069410787	52.497955	13
CGTTTAC	35	2.0789725E-5	49.99805	29
GTTTACT	30	5.8636745E-4	46.66485	30
TATAGTT	30	5.8636745E-4	46.66485	14
GTTATAG	30	5.8636745E-4	46.66485	12
ATAGTTA	35	0.0012503307	40.01208	15
CCGTTTA	45	9.164792E-5	38.88737	28
TTACTGG	65	4.8330367E-7	37.69084	32
TAGTTAC	40	0.0024090058	35.010574	16
ACCGTCC	40	0.0024130414	34.99864	8
CTAGGAC	50	1.703621E-4	34.99864	3
CTGCAAA	65	2.0921627E-5	32.306435	11
GACGCCT	55	2.9815087E-4	31.81694	42