H3W35AFXY_n01_adr3wtzt14s68.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s68.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	289298
Sequences flagged as poor quality	0
Sequence length	76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGT	760	0.2627048925329591	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	464	0.16038825017801714	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	419	0.14483335522540772	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	400	0.13826573291208374	No Hit
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATT	304	0.10508195701318364	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	302	0.10439062834862321	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	299	0.1033536353517826	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	296	0.10231664235494195	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	295	0.10197097802266177	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGTAG	20	0.006945717	52.50208	3
TAATCTC	30	5.8659207E-4	46.676582	17
CGCTTTT	55	6.672104E-6	38.18993	26
CCTAGAC	65	4.8518086E-7	37.693794	3
TCTAATC	40	0.0024159818	35.001385	2
CGACTAA	60	1.213078E-5	35.001385	51
TTAACGT	50	1.7069292E-4	35.00138	69
CTAGACC	85	1.0599615E-7	32.94248	4
TAACCCT	55	2.9902975E-4	31.81394	55
GTCTTAA	45	0.0042987117	31.11772	27
GTACCCT	45	0.0043023513	31.112339	6
AGACGTA	45	0.0043023513	31.112339	19
GTCCACA	45	0.0043023513	31.112339	1
GGATTAT	45	0.0043023513	31.112339	1
TAGACTG	45	0.0043059937	31.106964	42
GTAAACC	60	4.968998E-4	29.172863	22
GGTAAAC	60	4.974032E-4	29.16782	21
TTCCTAG	60	4.974032E-4	29.16782	1
GCGAGTC	60	4.974032E-4	29.16782	23
TAGACCG	85	3.9443257E-6	28.824669	5