H3W35AFXY_n01_adr3wtzt14s66.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s66.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	94145
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGT	156	0.16570184290190662	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	132	0.1402092516862287	No Hit
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATT	120	0.12746295607838973	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	107	0.11365446916989749	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	102	0.10834351266663127	No Hit
GTATAGTACTAACCACAATTGTAAGTTGTACTACCCGTATGAAGCACAAG	98	0.10409474746401826	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGGTA	20	7.89091E-5	70.0	15
AGACACC	15	0.0022185445	70.0	48
TAGCCCT	20	0.006932318	52.5	5
CGCTCTA	20	0.006932318	52.5	7
TACTGTG	20	0.006932318	52.5	7
GGACGGT	20	0.006932318	52.5	6
TCACGTC	20	0.006932318	52.5	47
CATATAA	30	5.8517756E-4	46.666664	1
CCGGTAA	30	5.8517756E-4	46.666664	16
CGGTAAT	30	5.8517756E-4	46.666664	17
TACGCTT	35	0.0012499032	40.000004	23
ATATAAG	35	0.0012499032	40.000004	2
AGACCAT	35	0.0012499032	40.000004	6
TCCACCG	35	0.0012499032	40.000004	12
ACGCTTA	35	0.0012499032	40.000004	24
AACTCCA	35	0.0012499032	40.000004	9
GCATGTT	35	0.0012499032	40.000004	20
TATAAGA	35	0.0012499032	40.000004	3
GGTAATA	40	0.0024082013	35.0	18
GTACAAG	40	0.0024082013	35.0	1