H3W35AFXY_n01_adr3wtzt14s54.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s54.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	94178
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGT	190	0.20174563061436854	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	142	0.15077831340652806	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	106	0.11255282550064771	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	98	0.10405827263267431	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATGAC	15	0.0022185484	70.0	3
CCTTATA	15	0.0022185484	70.0	2
CACGAGC	15	0.0022185484	70.0	33
CTGCGTT	15	0.0022185484	70.0	9
TTGCGAC	15	0.0022185484	70.0	47
GCATATT	15	0.0022185484	70.0	1
ATTAGTG	20	0.006932329	52.5	3
TAGTTTG	20	0.006932329	52.5	4
AAGATTG	20	0.006932329	52.5	43
GCGTAAA	20	0.006932329	52.5	22
TCTGAGC	35	0.0012499068	40.0	8
GCGCGTA	35	0.0012499068	40.0	20
CTGACAT	35	0.0012499068	40.0	58
GTCTTCT	35	0.0012499068	40.0	49
CACAACA	35	0.0012499068	40.0	62
AAAGGGT	35	0.0012499068	40.0	30
TAAAGGG	40	0.0024082076	35.0	29
CATGAGT	40	0.0024082076	35.0	62
GCTGACA	40	0.0024082076	35.0	57
TGACATG	40	0.0024082076	35.0	59