H3W35AFXY_n01_adr3wtzt14s52.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s52.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	150105
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATT	276	0.18387129009693215	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	243	0.16188667932447287	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	226	0.15056127377502415	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	219	0.14589787148995703	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGT	203	0.13523866626694647	No Hit
GTCTTGTACCGACGACAGATCTTTCAAATGTCTGCCCTATCAACTTTTGA	171	0.11392025582092535	No Hit
CCTTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT	168	0.11192165484161087	No Hit
GTATTACGACGCGAGAGGTGAAATTCTTGGACCGTCGTAAGACTAACTTA	160	0.10659205223010558	No Hit
GTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCT	153	0.10192864994503847	No Hit
GTATAGTACTAACCACAATTGTAAGTTGTACTACCCGTATGAAGCACAAG	151	0.10059624929216215	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTCAC	20	0.006941242	52.49825	10
TATGTGC	20	0.006941242	52.49825	6
CGTCATG	35	0.00125249	39.998665	2
GCCCTAG	45	9.165515E-5	38.887592	11
GCAACTG	40	0.0024092128	35.010494	27
TAGTTCT	50	1.703755E-4	34.998833	15
TTGTCTC	65	2.0924093E-5	32.306618	10
GGGAATA	45	0.004297352	31.110075	1
AGTACTA	45	0.004297352	31.110075	5
TGACTGG	45	0.004297352	31.110075	32
AGTTCTA	60	4.9648876E-4	29.165695	16
ACCCGGG	60	4.9648876E-4	29.165695	12
CTATCCC	50	0.0071918946	27.999067	4
TTTCGGA	50	0.0071918946	27.999067	1
CGTTGCA	50	0.0071918946	27.999067	65
TAGTACT	50	0.0071918946	27.999067	4
CTTACAC	50	0.0071918946	27.999067	3
AGGTCCG	50	0.0071918946	27.999067	39
ATATGCT	75	5.5574994E-5	27.999065	4
ATCTTTT	115	4.8466973E-8	27.390392	7