H3W35AFXY_n01_adr3wtzt14s45.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s45.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	144418
Sequences flagged as poor quality	0
Sequence length	76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	286	0.19803625586838203	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	270	0.1869573044911299	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	268	0.1855724355689734	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	220	0.15233558143721695	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	198	0.13710202329349527	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	188	0.13017767868271268	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAACCCT	20	0.006940881	52.49792	6
CCAAAAG	20	0.006940881	52.49792	50
TTGAGTT	40	0.0024129264	34.998615	34
TCAATTC	40	0.0024129264	34.998615	25
CTGTTGC	40	0.0024129264	34.998615	9
TTTGAGT	40	0.0024129264	34.998615	33
CTTACAC	40	0.0024129264	34.998615	3
TCTAGAG	45	0.004296949	31.10988	2
GTCAATT	45	0.004296949	31.10988	24
CGTCAAT	45	0.004296949	31.10988	23
CTTTTTT	160	0.0	30.623789	9
CCGTCAA	50	0.0071912236	27.998892	22
TGTTGCG	50	0.0071912236	27.998892	10
TCGTAGA	50	0.0071912236	27.998892	2
TACAGGA	50	0.0071912236	27.998892	2
TCTTTTT	180	0.0	27.221146	8
GGGGTGT	65	7.9112937E-4	26.931337	16
CTAAGGT	70	0.0012216487	24.99901	4
AGGGGGC	85	1.3016419E-4	24.704903	10
ATCTTTT	215	5.456968E-12	22.789795	7