H3W35AFXY_n01_adr3wtzt14s3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	604605
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	2049	0.33889895055449426	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	1886	0.3119391999735364	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	1839	0.3041655295606222	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	1392	0.23023296201652318	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	956	0.15811976414353174	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	902	0.14918831303082178	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATT	842	0.13926447846114404	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATCGT	35	0.0012554863	39.99877	9
TAGAATA	50	1.7090038E-4	35.00182	4
CGTAATC	80	6.240043E-8	35.00182	20
GCGGGTA	60	1.2158502E-5	34.998924	14
TTTCGGA	210	0.0	33.348858	1
ACGTAAT	75	1.4896814E-6	32.66836	19
TAGCGCC	45	0.00430751	31.110153	10
CTCGTAT	125	1.05501385E-10	30.799053	39
TTAGAAT	70	3.486898E-5	30.00156	3
AGCGTAA	60	4.982427E-4	29.165771	50
GTATTAT	50	0.007191342	28.013039	1
CTATAGG	50	0.007191342	28.013039	1
AGCGTTT	50	0.007208789	27.99914	16
TATGCAA	50	0.007208789	27.99914	10
TGCTTGA	140	3.947207E-10	27.499155	55
GTATGCC	140	3.947207E-10	27.499155	42
GACGTAA	90	6.1667233E-6	27.223637	18
GTCCTAT	65	7.933336E-4	26.935616	1
CCTAGTC	65	7.952531E-4	26.924479	3
TTCGGAA	255	0.0	26.079786	2