H3W35AFXY_n01_adr3wtzt14s37.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s37.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	198492
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	297	0.14962819660238197	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	246	0.12393446587267999	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	239	0.12040787538036797	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	215	0.1083167079781553	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	203	0.10227112427704894	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATT	199	0.1002559297100135	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAGCTAG	20	0.0069437055	52.499813	6
TATACCG	20	0.0069437055	52.499813	5
TAGTGGT	35	0.0012532823	39.999855	4
ACCCATG	35	0.0012532823	39.999855	7
GTATGCC	75	3.517016E-8	37.333202	42
CGGGTTA	40	0.002414672	34.999874	15
TGTCTAA	50	1.7054344E-4	34.999874	34
CTTGAAA	80	6.2069375E-8	34.999874	57
AGACCAT	90	1.7463572E-7	31.111002	6
ACACTTG	45	0.004300035	31.111002	6
GTCTTCT	95	2.804827E-7	29.47358	49
GCCGTCT	95	2.804827E-7	29.47358	46
TAGAGTT	75	5.565279E-5	27.9999	30
TCTGAGC	50	0.0071963533	27.999899	8
GGTACAC	50	0.0071963533	27.999899	3
ACACGCG	50	0.0071963533	27.999899	52
CGTCTTC	100	4.3937507E-7	27.999899	48
GCTTGAA	100	4.3937507E-7	27.999899	56
CCGTCTT	100	4.3937507E-7	27.999899	47
ATGCCGT	100	4.3937507E-7	27.999899	44