H3W35AFXY_n01_adr3wtzt14s31.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s31.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	107662
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATGCCGT	321	0.29815533800226635	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	187	0.17369173896082182	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	181	0.16811874198881685	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	168	0.1560439152161394	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	128	0.11889060206943954	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	127	0.11796176924077206	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
GACGTAATCAATGCGAGTTAATGACTCACACTTACTGGGAATTCCAAGTT	110	0.1021716111534246	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATGTTA	15	0.0022198246	69.99675	21
ATGTTAT	15	0.0022198246	69.99675	22
TGTAAGG	15	0.0022198246	69.99675	2
CGCCCTA	15	0.0022198246	69.99675	10
TAGAGTT	25	2.3818278E-4	55.9974	30
CTAGAGT	20	0.006936292	52.497562	29
TCTGACC	20	0.006936292	52.497562	8
TTATCTA	20	0.006936292	52.497562	25
AGGCACG	20	0.006936292	52.497562	6
CCATACG	20	0.006936292	52.497562	9
GTGTAAG	20	0.006936292	52.497562	1
ACCAATA	20	0.006936292	52.497562	39
ATACGAT	20	0.006936292	52.497562	11
TAAGTTC	30	5.8568985E-4	46.6645	30
TGCACCG	30	5.8568985E-4	46.6645	5
TCTCATG	40	4.5682275E-5	43.74797	13
TGCACGA	35	0.001250992	39.998142	42
ATATTAA	35	0.001250992	39.998142	1
ACGAATG	35	0.001250992	39.998142	45
TCCTGCA	40	0.0024102877	34.998375	2