H3W35AFXY_n01_adr3wtzt14s2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	108005
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATT	295	0.2731355029859729	No Hit
GTCTTGTACCGACGACAGATCTTTCAAATGTCTGCCCTATCAACTTTTGA	226	0.2092495717790843	No Hit
GTTATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACACACGA	198	0.1833248460719411	No Hit
GTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCT	177	0.16388130179158372	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	176	0.16295541873061434	No Hit
GTATAGTACTAACCACAATTGTAAGTTGTACTACCCGTATGAAGCACAAG	171	0.15832600342576733	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	171	0.15832600342576733	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	162	0.14999305587704273	No Hit
GTACAAGACCATACGATCTGCATGTTATCTAGAGTTCAACCAATATAACG	160	0.14814128975510393	No Hit
CCTTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT	152	0.14073422526734874	No Hit
GTACTATTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCC	138	0.12777186241377714	No Hit
CCTTATGGGACATGTGCTTTTATTAGGCTAAAACCAAGCGATCGCAAGAT	136	0.12592009629183834	No Hit
GTACTAACCACAATTGTAAGTTGTACTACCCGTATGAAGCACAAGTTCAA	132	0.12221656404796073	No Hit
GTCTTACGACGGTCCAAGAATTTCACCTCTCGCGTCGTAATACTAATGCC	128	0.11851303180408315	No Hit
GTATTACGACGCGAGAGGTGAAATTCTTGGACCGTCGTAAGACTAACTTA	128	0.11851303180408315	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	117	0.10832831813341974	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAGCCA	15	0.002219435	70.00001	4
TAATAGT	20	0.0069350805	52.5	28
AAGTAAT	20	0.0069350805	52.5	25
TAAAGGC	20	0.0069350805	52.5	4
TTTGCAC	20	0.0069350805	52.5	20
ACTCCGT	20	0.0069350805	52.5	35
ATAAGAA	50	6.1316314E-8	48.999996	4
ATATAAG	45	1.6715403E-6	46.666668	2
TATAAGA	45	1.6715403E-6	46.666668	3
TAAGAAC	45	1.6715403E-6	46.666668	5
AAGAACT	50	3.4515815E-6	42.0	6
TAATACG	60	1.2063894E-5	35.000004	20
AATACGC	60	1.2063894E-5	35.000004	21
GGGCGAT	50	1.7002625E-4	35.0	11
AAACAGT	40	0.0024097736	35.0	44
AGGTCTT	50	1.7002625E-4	35.0	7
TAATCTC	40	0.0024097736	35.0	69
GGTAATA	65	2.0865291E-5	32.307693	18
CATATAA	65	2.0865291E-5	32.307693	1
GAACTCC	65	2.0865291E-5	32.307693	8