H3W35AFXY_n01_adr3wtzt14s15.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s15.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	308742
Sequences flagged as poor quality	0
Sequence length	76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	877	0.284055943149944	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	806	0.2610593958709861	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	748	0.24227348400930226	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	539	0.17457942230082074	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	483	0.15644130050333288	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CTTATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGT	469	0.15190677005396092	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	434	0.140570443930531	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATAAA	15	0.0022233592	70.0	1
TATATAC	20	0.0069472454	52.5	3
GTCTAAT	20	0.0069472454	52.5	1
CGTAATT	20	0.0069472454	52.5	12
CCATACA	40	0.0024167022	35.0	1
GTATAGT	60	1.2136716E-5	35.0	1
CGAGTGC	65	2.0990688E-5	32.307693	70
TATGTGA	55	2.988422E-4	31.81818	6
AATACGC	45	0.0043036286	31.111109	21
TTAGACA	70	3.4826637E-5	30.0	4
TATATGT	60	4.9759523E-4	29.166666	4
GTCCTAA	75	5.5750326E-5	28.0	1
TATAGTA	75	5.5750326E-5	28.0	2
TAGACAG	100	4.406993E-7	27.999998	5
ATAACAC	50	0.0072023305	27.999998	46
TATAAGA	50	0.0072023305	27.999998	3
AACAGCG	50	0.0072023305	27.999998	7
TTCTCAA	50	0.0072023305	27.999998	2
GTACCGA	65	7.9460815E-4	26.923079	6
TTGTACC	65	7.9460815E-4	26.923079	4