H3W35AFXY_n01_adr3wtzt14s12.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n01_adr3wtzt14s12.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	422824
Sequences flagged as poor quality	0
Sequence length	76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	2466	0.583221387622273	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	2329	0.5508201994210358	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	2287	0.5408869884396345	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	1782	0.42145195163945287	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	842	0.1991372296747583	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	794	0.18778498855315687	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
GAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTC	616	0.14568709439388491	No Hit
GTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACG	526	0.12440164229088227	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATAGG	20	0.0069426545	52.512154	1
ATACATT	30	5.875312E-4	46.66643	6
TAGGACT	95	0.0	44.2103	4
CTATACT	50	3.4757722E-6	41.999786	4
GGCATAG	35	0.0012548999	39.999798	5
TATAATA	45	9.185903E-5	38.89329	2
CTAGGAC	110	0.0	38.181625	3
GAATCAG	95	1.8735591E-10	36.84192	35
GGTTGCA	105	1.4551915E-11	36.66648	16
AGGACTA	110	2.3646862E-11	34.999825	5
CGGGATA	50	1.7087096E-4	34.999825	15
AGATCTA	40	0.00241777	34.99982	68
CGATTCG	40	0.00241777	34.99982	14
ACATGTT	40	0.00241777	34.99982	33
ACTGGTC	65	2.1009675E-5	32.30753	8
ATGGTTG	120	6.548362E-11	32.08317	14
ACTATAC	55	2.9903676E-4	31.81802	3
TACGTCT	55	2.9903676E-4	31.81802	4
TCGGGGG	45	0.0043055178	31.110954	33
TATATCC	45	0.0043055178	31.110954	4