H3VNWAFXY_n02_adr3wtzt14s88.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n02_adr3wtzt14s88.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	317955
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	905	0.28463147300718655	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	852	0.26796244751615794	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	745	0.23430988661917568	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	724	0.22770517840574925	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	716	0.2251890990863487	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	684	0.21512478180874653	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	569	0.1789561415923637	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACATAGC	20	0.0069095544	52.57018	59
TAATACT	60	2.628076E-7	40.75694	4
TACCGAC	35	0.0012597697	39.96282	26
TTATACT	35	0.0012656238	39.925167	4
TTAATAC	45	9.284624E-5	38.816135	3
ACGTTAC	40	0.0024271354	34.967464	22
TAGCCTA	45	0.004298277	31.117403	34
GTTACCG	45	0.004322167	31.08219	24
TCCGCGG	45	0.004338152	31.05876	10
TCCTCAA	45	0.004338152	31.05876	10
ACTTTGC	45	0.004338152	31.05876	8
GGGGCTA	45	0.004338152	31.05876	15
GTCCTAG	45	0.0043421555	31.052906	1
TTTATAC	45	0.0043421555	31.052906	3
TAGACGA	70	3.462584E-5	30.023075	46
GACACAA	60	4.9353024E-4	29.205654	66
GAGTGTA	50	0.0071404926	28.048035	70
GGACACA	75	5.5215685E-5	28.03743	65
TGAGCAC	50	0.007153691	28.03743	53
TTACCGA	50	0.0072332844	27.973974	25