H3VNWAFXY_n01_adr3wtzt14s92.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n01_adr3wtzt14s92.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	531411
Sequences flagged as poor quality	0
Sequence length	76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGT	2375	0.44692337945582605	No Hit
ATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGTCTT	1246	0.23447011823240393	No Hit
ACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGTCTTCT	592	0.11140153290014695	Illumina PCR Primer Index 7 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACAATA	20	0.0069452254	52.509106	2
GAGTCTA	40	0.002418442	34.99948	18
TCCTACA	115	4.0017767E-11	33.484066	2
CTCGTAT	575	0.0	32.260395	39
TAATAGT	45	0.0043067094	31.110651	68
TTTCGGA	300	0.0	30.33574	1
GTATGCC	620	0.0	29.918913	42
TATGCTT	60	4.978417E-4	29.168982	5
TCGTATG	645	0.0	28.759266	40
GCTTGAA	650	0.0	28.538038	56
GCCGTCT	650	0.0	28.538038	46
GTCTTCT	640	0.0	28.437078	49
TGCTTGA	655	0.0	28.320192	55
TCCATAG	50	0.0072008357	28.004856	2
ATAGACT	50	0.0072008357	28.004856	4
TACTAAT	50	0.0072008357	28.004856	2
GTATGTA	50	0.007204145	28.002222	1
AAGTAAT	50	0.0072074556	27.999586	65
CTTGAAA	675	0.0	27.999586	57
TCTTTTT	1415	0.0	27.952745	8