H3VNWAFXY_n01_adr3wtzt14s85.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n01_adr3wtzt14s85.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	520653
Sequences flagged as poor quality	0
Sequence length	76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCCGT	1518	0.29155694867791027	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	1508	0.28963628366685684	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	1323	0.2541039809623684	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	1228	0.23585766335736083	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	1008	0.19360303311418547	No Hit
ATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCCGTCTT	706	0.13559894978037196	RNA PCR Primer, Index 29 (95% over 23bp)
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	570	0.10947790563004534	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	561	0.10774930712009725	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACACTT	40	0.002417294	35.00274	5
TTAGAGC	50	1.7084152E-4	35.002735	3
TCTACTA	40	0.0024184333	34.99938	27
CTCGTAT	395	0.0	29.239985	39
TCGGTTA	60	4.978312E-4	29.168947	8
GTATGCC	420	0.0	28.332829	42
TCGTATG	410	0.0	28.17023	40
ATTGTAC	50	0.007204052	28.00219	3
ATAGTGA	50	0.0072074304	27.999502	48
TTTCGGA	205	0.0	27.329708	1
GCCGTCT	430	0.0	26.859985	46
TTACACT	105	6.760074E-7	26.668753	4
CTTGAAA	440	0.0	26.24953	57
CCGTCTT	445	0.0	25.954594	47
GTCTTCT	445	0.0	25.954594	49
TTCTGCT	450	0.0	25.666208	52
GCTTGAA	465	0.0	25.59094	56
TGCTTGA	455	0.0	25.384163	55
CTTCTGC	470	0.0	25.318697	51
GCTAAAT	70	0.0012257812	24.999552	26