H3VNWAFXY_n01_adr3wtzt14s60.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n01_adr3wtzt14s60.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	637470
Sequences flagged as poor quality	0
Sequence length	76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGT	2876	0.451158485889532	No Hit
ATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCTT	1434	0.22495176243587933	Illumina Paired End PCR Primer 2 (95% over 22bp)
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	1419	0.22259871052755423	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	1335	0.20942161984093371	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	1167	0.1830674384676926	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	891	0.1397712833545108	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	738	0.1157701538895948	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	644	0.10102436193075753	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATAGAG	65	9.969881E-9	43.097977	5
ACTTAGG	55	2.986153E-4	31.82874	1
ATAATAC	45	0.0042967475	31.126318	3
GCACTAT	45	0.0042967475	31.126318	6
GTCTTCT	695	0.0	29.206867	49
TCGTATG	735	0.0	29.04586	40
CTCGTAT	645	0.0	28.757952	39
GTATGCC	755	0.0	28.739985	42
TGCTTGA	760	0.0	28.090408	55
TATGCCG	790	0.0	27.466692	43
CCGTCTT	765	0.0	26.99183	47
TATATGG	65	7.932743E-4	26.936237	2
GCCGTCT	780	0.0	26.921448	46
TTCTGCT	795	0.0	26.85372	52
ATCTTTT	1165	0.0	26.450691	7
TCTTTTT	1095	0.0	26.222857	8
CTTGAAA	820	0.0	26.03501	57
CGTATGC	840	0.0	25.831772	41
TTGAAAA	860	0.0	25.637983	58
TCTTCTG	820	0.0	25.608206	50