H3VNWAFXY_n01_adr3wtzt14s59.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n01_adr3wtzt14s59.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	396164
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGT	1159	0.2925556082834382	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	867	0.2188487596046082	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	782	0.19739299885905837	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	774	0.19537363314183015	No Hit
ATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCTT	632	0.15952989166102927	Illumina Paired End PCR Primer 2 (95% over 22bp)
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	587	0.14817095950162054	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	584	0.14741369735765997	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	535	0.13504508233963713	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTCTAC	25	2.379002E-4	56.048107	1
AGTAGAA	40	0.0024163285	35.003536	2
CTAGTGC	50	1.7074504E-4	35.003532	3
TTAGGTC	40	0.0024178254	34.999115	23
CATAACT	40	0.0024178254	34.999115	34
GCCGTCT	370	0.0	34.053196	46
CTCGTAT	315	0.0	33.332493	39
GTATGCC	365	0.0	32.601917	42
TTTCGGA	140	0.0	32.52792	1
TATGCCG	375	0.0	31.732529	43
GCTTAAT	45	0.004305618	31.110327	22
AGTCTAT	45	0.004305618	31.110327	54
ACCGTTT	45	0.004305618	31.110327	12
CTTGAAA	385	0.0	30.90831	57
GTCTTCT	400	0.0	30.624226	49
GCTTGAA	410	0.0	29.877295	56
TCGTATG	390	0.0	29.614637	40
TCTTCTG	405	0.0	29.381973	50
TGAACGG	60	4.9755245E-4	29.169613	5
TTCTGCT	430	0.0	28.487654	52