H3VNWAFXY_n01_adr3wtzt14s54.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n01_adr3wtzt14s54.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	221717
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGT	933	0.42080670404163867	No Hit
ATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGTCTT	438	0.197549127942377	TruSeq Adapter, Index 7 (95% over 21bp)
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	321	0.14477915540982422	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	255	0.11501147859658935	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	238	0.10734404669015005	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	231	0.10418686884632211	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTTATA	20	0.006944853	52.49966	11
TACTTCT	30	5.86927E-4	46.66637	4
GTTATAG	30	5.86927E-4	46.66637	12
GTCTTAC	40	4.5707377E-5	43.76946	1
CTCGTAT	175	0.0	41.99973	39
GTCTTCT	175	0.0	41.99973	49
TCTAGCC	45	9.178238E-5	38.888638	8
TAGTAGT	45	9.178238E-5	38.888638	41
TGCTTGA	190	0.0	38.683964	55
TGAAAAA	195	0.0	37.692062	59
GTATGCC	195	0.0	37.692062	42
TATGCCG	200	0.0	36.749763	43
CCGTCTT	200	0.0	36.749763	47
GCCGTCT	200	0.0	36.749763	46
GTAGGAT	40	0.0024153148	34.999775	3
TTATAGT	40	0.0024153148	34.999775	13
TTGAAAA	220	0.0	34.999775	58
TATAGTT	40	0.0024153148	34.999775	14
AGTAGTG	50	1.7061067E-4	34.999775	42
GCTTGAA	210	0.0	34.99977	56