H3VNWAFXY_n01_adr3wtzt14s42.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n01_adr3wtzt14s42.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	326560
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCGT	1098	0.33623223909848116	No Hit
ATACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCGTCTT	621	0.1901641352278295	RNA PCR Primer, Index 47 (95% over 22bp)
ACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCGTCTTCT	339	0.10380940715335618	RNA PCR Primer, Index 47 (95% over 24bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACTACT	30	5.873886E-4	46.665543	31
TTCTAAT	35	0.0012508231	40.02355	1
CGAACTA	35	0.0012545979	39.99904	29
TCTAGGC	55	2.9865344E-4	31.822289	8
ATAATAG	45	0.0043012705	31.115128	3
TATACTC	45	0.0043044956	31.110363	37
GTCTAAC	60	4.959452E-4	29.183838	1
AGAATAA	60	4.9772765E-4	29.165964	33
TTTCGGA	185	0.0	28.395086	1
AAGAATA	50	0.0072037773	27.999327	32
GGGCAAA	50	0.0072037773	27.999327	11
GATCTTT	865	0.0	26.303972	6
GTATGCC	320	0.0	25.155645	42
TCTAGGG	140	1.1827069E-8	25.003225	3
GATCTGG	870	0.0	24.945747	6
CTTTTTT	815	0.0	24.907375	9
CTCGTAT	310	0.0	24.838112	39
GTCTTCT	325	0.0	24.768633	49
GTACATG	85	1.3010067E-4	24.720428	1
CTGAGCT	85	1.3064314E-4	24.705288	9