H3VNWAFXY_n01_adr3wtzt14s39.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n01_adr3wtzt14s39.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	158714
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGT	930	0.5859596506924405	No Hit
ATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTCTT	417	0.262736746600804	Illumina PCR Primer Index 11 (95% over 22bp)
ACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTCTTCT	198	0.12475269982484218	Illumina PCR Primer Index 11 (95% over 24bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCTTACC	20	0.006941056	52.5	45
GCTAGGA	20	0.006941056	52.5	11
CTTAGGT	20	0.006941056	52.5	23
CTAGGAG	20	0.006941056	52.5	12
GACGTGG	35	2.0792748E-5	49.999996	49
GAACATT	30	5.8640144E-4	46.666664	11
CTCTTCA	35	0.0012525019	39.999996	33
TATAGTT	35	0.0012525019	39.999996	5
GTATGCC	185	0.0	37.837837	42
TATGCCG	200	0.0	36.750004	43
TGCCGTC	185	0.0	35.945946	45
TAGCCTG	50	1.7038609E-4	35.000004	56
TGCTTGA	190	0.0	35.0	55
TCTTAAC	40	0.0024131762	35.0	3
CGTATGC	205	0.0	34.146343	41
ATGCCGT	205	0.0	34.146343	44
CTTGAAA	195	0.0	34.102566	57
GTCTTCT	165	0.0	33.939392	49
CCGTCTT	200	0.0	33.250004	47
GCCGTCT	200	0.0	33.250004	46