H3VNWAFXY_n01_adr3wtzt14s28.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n01_adr3wtzt14s28.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	453026
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATT	1026	0.22647706754137734	No Hit
CTTATACACATCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATGCCGT	999	0.22051714471134107	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	711	0.15694463452428778	No Hit
CCTTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT	652	0.14392109945124562	No Hit
GTCTTGTACCGACGACAGATCTTTCAAATGTCTGCCCTATCAACTTTTGA	648	0.14303814792086988	No Hit
GTATAGTACTAACCACAATTGTAAGTTGTACTACCCGTATGAAGCACAAG	592	0.13067682649560952	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	591	0.1304560886130156	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	575	0.12692428249151264	No Hit
GTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCT	572	0.1262620688437308	No Hit
GTCTTACGACGGTCCAAGAATTTCACCTCTCGCGTCGTAATACTAATGCC	561	0.12383395213519754	No Hit
GTTATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACACACGA	546	0.12052288389628851	No Hit
TCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAAT	511	0.11279705800550077	No Hit
GTATTACGACGCGAGAGGTGAAATTCTTGGACCGTCGTAAGACTAACTTA	500	0.1103689412969675	No Hit
GTACTATTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCC	490	0.10816156247102815	No Hit
ATACACATCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATGCCGTCTT	485	0.10705787305805847	Illumina PCR Primer Index 10 (95% over 22bp)
TCGTAATACTAATGCCCCCAAACTGCTTCTATTAATCATTACCTCTTGAT	483	0.1066163972928706	No Hit
GTACAAGACCATACGATCTGCATGTTATCTAGAGTTCAACCAATATAACG	465	0.10264311540617978	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	170	0.0	39.1174	39
TAAACTA	45	9.1934126E-5	38.888645	5
GTATGCC	200	0.0	34.99978	42
GCCGTCT	215	0.0	32.55793	46
CGTATAC	45	0.004305865	31.110914	26
TATATGG	45	0.004305865	31.110914	2
TGCTTGA	250	0.0	29.399815	55
TCTTCTG	240	0.0	29.166483	50
ATATATA	75	5.5641744E-5	28.012192	1
CGTATGC	250	0.0	27.999825	41
GTCTTCT	250	0.0	27.999825	49
TTAGTGA	50	0.0072060507	27.999823	3
TATGCCG	255	0.0	27.450808	43
ACTGAAT	90	6.1650426E-6	27.22205	8
TCTCGTA	245	0.0	27.142685	38
ATAAGAA	155	4.3655746E-11	27.096603	4
GTTAGAG	240	0.0	26.249834	62
AGTTAGA	240	0.0	26.249834	61
TCTTTTT	535	0.0	26.16806	8
CTTTTTT	545	0.0	25.687912	9