H3VNWAFXY_n01_adr3wtzt14s15.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n01_adr3wtzt14s15.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	692991
Sequences flagged as poor quality	0
Sequence length	76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGT	2362	0.3408413673482051	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	1931	0.2786471974383506	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	1788	0.25801200881396724	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	1669	0.2408400686300399	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	1210	0.17460544220632013	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	1138	0.16421569688495233	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	1023	0.1476209647744343	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATTGA	25	2.387938E-4	56.011547	1
GTATGCC	450	0.0	35.77741	42
GTCTATA	40	0.0024163267	35.007217	1
CTCGTAT	450	0.0	34.99964	39
GTCGTAT	40	0.002418894	34.99964	48
GTCTTCT	495	0.0	32.524918	49
CCGTCTT	510	0.0	32.25457	47
TATGCCG	500	0.0	32.199665	43
TGCTTGA	510	0.0	31.568302	55
GCCGTCT	525	0.0	30.66635	46
GCTTGAA	530	0.0	30.377047	56
CGTATGC	550	0.0	29.272427	41
CTTGAAA	565	0.0	29.114744	57
ATGCCGT	565	0.0	28.495281	44
TCTTCTG	570	0.0	28.245323	50
TTGAAAA	585	0.0	28.119368	58
TCGTATG	575	0.0	27.999712	40
TATTGGG	140	3.947207E-10	27.5017	2
TCTCGTA	575	0.0	27.391024	38
TAGGATG	65	7.953254E-4	26.924742	5