H3VL5AFXY_n01_p5e5.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VL5AFXY_n01_p5e5.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1481770
Sequences flagged as poor quality	0
Sequence length	151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGA	2825	0.19065037084027886	No Hit
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	2713	0.1830918428636023	No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA	2402	0.16210343035693797	No Hit
GACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGAT	2381	0.16068620636131115	No Hit
GTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACT	2033	0.13720078014806616	No Hit
GAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGA	1930	0.13024963388380112	No Hit
ATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTC	1874	0.12647036989546287	No Hit
CTCATAAGGTGCCAGCGGAGTCCTATAAGCAACATCCGCTGATCCCTGGT	1556	0.10500954939025625	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GACTACC	600	39.8837	145
TATAGGT	880	38.726116	3
TCGCGCG	860	37.932796	9
AGGTCGC	990	35.155624	6
TCCCCCC	895	34.829422	8
GGTCGCG	1015	32.85433	7
GTCGCGC	1005	32.459908	8
CCCCCCG	1005	31.017244	9
GTCTACG	1090	29.271452	1
ACCATAC	1265	28.088182	1
TACGAGT	1200	27.794914	4
ATACTCC	1240	27.48305	4
CTCCCCC	1140	27.34415	7
TAGGACA	800	27.190676	4
CCATACT	1330	26.16847	2
CATACTC	1385	25.652817	3
AGGTGCC	1360	25.586044	7
TAAGGTG	1400	25.377964	5
CCTATAA	2035	25.299505	1
TAGGTCG	1405	25.287651	5