H3VL5AFXY_n01_p5e3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VL5AFXY_n01_p5e3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	333103
Sequences flagged as poor quality	0
Sequence length	151
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	838	0.2515738375217275	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	654	0.19633566794655105	No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	612	0.18372695532613037	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	516	0.15490704076516873	No Hit
GACGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	411	0.12338525921411696	No Hit
CGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	348	0.1044721902834859	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATAGCA	40	0.0060428004	54.38536	2
GCTAGTG	40	0.0060428004	54.38536	2
ATTAGGC	75	2.5440208E-5	48.342545	3
ACACACG	155	1.4551915E-11	46.783108	1
CCATAGC	65	7.3226326E-4	44.623886	1
TAGGGTA	65	7.3226326E-4	44.623886	4
TAGGCAG	90	7.46329E-5	40.285454	5
GATCTAG	115	7.119066E-6	37.833294	1
CTGTACT	120	9.532248E-6	36.25691	4
TCTATAC	140	6.5821587E-7	36.25691	3
TACACTG	125	1.260914E-5	34.80663	5
TAGGGGA	85	0.002736815	34.12415	4
GATCTTT	840	0.0	32.803867	6
TAGACGT	225	7.876224E-10	32.228363	4
CTATACT	90	0.0036214027	32.228363	4
TAATGTG	90	0.0036214027	32.228363	5
TACACTA	90	0.0036267329	32.21869	7
CTTCCGA	1715	0.0	31.288761	1
CCTGTAC	165	2.3765897E-6	30.763435	3
AGGCAGT	95	0.0047184173	30.532133	6