H3VL5AFXY_n01_p5c2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VL5AFXY_n01_p5c2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1025792
Sequences flagged as poor quality	0
Sequence length	151
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	1876	0.18288307961068132	No Hit
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGA	1639	0.1597789805340654	No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA	1465	0.14281647741452458	No Hit
ATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTC	1396	0.13608996755677566	No Hit
GTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACT	1296	0.1263414025455453	No Hit
GACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGAT	1262	0.12302689044172699	No Hit
TCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGAT	1064	0.10372473171949088	No Hit
GGTATAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTC	1064	0.10372473171949088	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGATCT	1245	44.263187	4
CTTCCGA	1245	43.68078	1
TTCCGAT	1320	41.198917	2
TCCCCCC	645	37.090954	8
TCGCGCG	465	35.858215	9
CCCCCCG	675	35.442467	9
CGATCTG	810	34.017082	5
CTCCCCC	825	28.998383	7
GTCGCGC	565	28.228514	8
GGTCGCG	565	28.228514	7
TACCCGG	830	27.955698	6
ATACTCC	920	27.58536	4
ATACCCG	875	27.346663	5
CCATACT	935	27.142815	2
ACTCCCC	910	27.091682	6
AGGTCGC	610	26.151182	6
ACCTATA	865	25.986277	1
TATAGGT	645	25.856314	3
CCTATAA	1275	25.591797	1
CATACTC	1055	25.430082	3