H3VL5AFXY_n01_p4h5.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VL5AFXY_n01_p4h5.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	979629
Sequences flagged as poor quality	0
Sequence length	151
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	1591	0.16240842196382507	No Hit
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGA	1318	0.13454072919441953	No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA	1313	0.13403033189095054	No Hit
GTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACT	1202	0.12269951175393949	No Hit
ACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAG	1192	0.12167871714700157	No Hit
ATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTC	1118	0.11412483705566087	No Hit
TCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGAT	1063	0.10851046671750224	No Hit
GGTATAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTC	987	0.10075242770477394	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCCCCCC	630	40.274246	8
CCCCCCG	675	38.663277	9
CCGATCT	1180	36.254227	4
CTTCCGA	1295	33.594646	1
TTCCGAT	1260	33.376907	2
CTCCCCC	790	33.035076	7
ACTCCCC	830	32.323044	6
ATACTCC	870	30.836926	4
CCATACT	905	30.445536	2
GTATATA	520	29.282259	1
CGATCTG	670	29.219822	5
CATACTC	1105	28.872145	3
CGAGTCG	770	28.250046	6
GTCTACG	1020	27.723818	1
ACCATAC	950	27.476885	1
ACACATA	720	27.192055	145
TACTCCC	1035	26.621462	5
GTCGGGT	840	25.890587	9
TACGAGT	880	25.542747	4
TCTACGA	1120	25.248478	2