H3VL5AFXY_n01_p4e3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VL5AFXY_n01_p4e3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	409849
Sequences flagged as poor quality	0
Sequence length	151
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per sequence GC content graph$

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTACTTGTTCGCTATCGGTCTCTCGCCAATATTTAGCTTTAGATGGAA	643	0.15688704864474476	No Hit
GTACTTGTTCGCTATCGGTCTCTCGCCAATATTTAGCTTTAGATGGAATT	528	0.12882793419039695	No Hit
TCACTGTACTTGTTCGCTATCGGTCTCTCGCCAATATTTAGCTTTAGATG	526	0.12833994959119088	No Hit
TTCCATCACTGTACTTGTTCGCTATCGGTCTCTCGCCAATATTTAGCTTT	517	0.12614401889476368	No Hit
CCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGG	507	0.12370409589873345	No Hit
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGA	475	0.11589634231143665	No Hit
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	460	0.11223645781739129	No Hit
GAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGA	417	0.10174478893446123	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTCCGAT	2105	0.0	50.631496	2
CCGATCT	2200	0.0	49.104256	4
CTTCCGA	2200	0.0	48.774696	1
TCCGATC	2290	0.0	46.857784	3
CACTGTA	425	0.0	40.942833	2
CATAGGG	125	2.7128408E-7	40.60164	2
CGATCTG	990	0.0	40.279404	5
ACTGTAC	465	0.0	38.98007	3
GATCTTT	650	0.0	37.92461	6
TACAGGG	155	3.4606273E-8	37.420864	2
CGATCTA	410	0.0	37.135647	5
TCACTGT	480	0.0	36.251465	1
CGATCTT	910	0.0	33.46289	5
CTGTACT	585	0.0	32.223522	4
CATCACT	425	0.0	30.707125	4
CTATACT	95	0.004723141	30.52755	4
CATACTG	100	0.006069133	29.001171	5
TAAGCAT	200	3.2452772E-7	29.001171	6
CTGTAGG	125	5.14738E-4	29.00117	4
ATCTTTT	725	0.0	28.997633	7