H3VL5AFXY_n01_p4d1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VL5AFXY_n01_p4d1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	608509
Sequences flagged as poor quality	0
Sequence length	151
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	1117	0.18356343127217511	No Hit
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGA	1093	0.17961936470947842	No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA	934	0.15348992373161285	No Hit
ACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAG	895	0.1470808155672307	No Hit
GTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACT	894	0.1469164794604517	No Hit
ATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTC	882	0.14494444617910335	No Hit
TCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGAT	822	0.13508427977236162	No Hit
GGTATAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTC	696	0.114377930318204	No Hit
GTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATT	676	0.11109120818262343	No Hit
GACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGAT	654	0.1074758138334848	No Hit
CTCATAAGGTGCCAGCGGAGTCCTATAAGCAACATCCGCTGATCCCTGGT	649	0.10665413329958966	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCCGA	730	0.0	47.66678	1
CCGATCT	815	0.0	42.695396	4
TTCCGAT	830	0.0	41.92379	2
CGATCTG	510	0.0	35.535892	5
TCCCCCC	355	0.0	32.673	8
TGCCTAC	250	7.094059E-11	31.897017	1
TCTTCCG	555	0.0	30.042236	5
CGAGTCG	535	0.0	29.810297	6
GTCGCGC	460	0.0	28.366915	8
CTACACC	565	0.0	28.227448	4
ATACTCC	490	0.0	28.109617	4
ATACAGG	155	5.5004377E-5	28.061892	6
CCATACT	570	0.0	27.97984	2
GTCTACG	650	0.0	27.88201	1
CATACTC	560	0.0	27.184958	3
CCTACAC	510	0.0	27.007278	3
CCCCCCG	430	0.0	26.974222	9
TGTAGGA	485	0.0	26.9047	2
TATAGGT	520	0.0	26.487907	3
TCCGATC	1350	0.0	26.312355	3