H3VL5AFXY_n01_p4c3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VL5AFXY_n01_p4c3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	633084
Sequences flagged as poor quality	0
Sequence length	151
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	1453	0.22951140764890599	No Hit
GTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACT	1027	0.16222175888191773	No Hit
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGA	1015	0.1603262758180589	No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA	977	0.15432391278250596	No Hit
ATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTC	976	0.15416595586051773	No Hit
GACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGAT	868	0.1371066082857883	No Hit
ACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAG	821	0.12968263295234123	No Hit
TCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGAT	740	0.11688812227129416	No Hit
GAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGA	707	0.11167554384568242	No Hit
GGTATAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTC	640	0.10109243007247062	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGATCT	995	0.0	48.091526	4
CTTCCGA	1020	0.0	47.619854	1
TTCCGAT	1120	0.0	42.720795	2
CCTACAC	410	0.0	42.439972	3
CGATCTG	575	0.0	41.609623	5
GGGCGAC	335	0.0	38.956093	7
CTACACC	485	0.0	38.866844	4
TCCCCCC	575	0.0	37.82693	8
GTCTAGG	155	3.468631E-8	37.417236	1
TCGCGCG	395	0.0	34.874195	9
CCGTGGG	210	3.783498E-10	34.52458	9
TCTTCCG	790	0.0	33.956455	5
ACTACCG	195	6.9812813E-9	33.462288	5
TCCTACA	525	0.0	33.14098	2
GTCGCGC	380	0.0	32.434933	8
CCATACT	695	0.0	32.336296	2
GGTCGCG	405	0.0	32.222942	7
TACGAGT	540	0.0	32.222942	4
GGCGACC	410	0.0	31.829979	8
GCGACCC	415	0.0	31.446487	9