H3VL5AFXY_n01_p4a12.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VL5AFXY_n01_p4a12.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	134573
Sequences flagged as poor quality	0
Sequence length	151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	250	0.18577277760026156	No Hit
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGA	230	0.17091095539224066	No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA	199	0.1478751309698082	No Hit
GTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATT	195	0.14490276652820402	No Hit
GTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACT	193	0.14341658430740192	No Hit
ATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTC	179	0.1330133087617873	No Hit
GACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGAT	169	0.12558239765777682	No Hit
ACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAG	161	0.11963766877456845	No Hit
GGTATAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTC	155	0.11517912211216218	No Hit
TCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGAT	151	0.11220675767055797	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGCTCG	25	9.35924E-4	87.02275	4
TTCTAAA	90	2.0274456E-8	56.403637	2
GACTGTA	40	0.0060421894	54.36901	7
ACTGTAA	55	3.2107293E-4	52.721462	8
ACACCGT	70	1.6854712E-5	51.799255	6
GTCTACG	115	2.4501787E-9	50.44797	1
ATATAGG	45	0.009611214	48.345974	6
ATAAGAC	45	0.009611214	48.345974	3
GACTGGC	45	0.009625345	48.328007	7
TATATAG	65	7.3044567E-4	44.627052	5
ATTGAAC	65	7.3044567E-4	44.627052	3
CCTACAC	85	5.308581E-5	42.658215	3
CGAGTCG	140	1.3957106E-8	41.439407	6
AGGACTG	70	0.0010520255	41.439407	5
ATACTCC	90	7.436432E-5	40.28831	4
TCCCCCC	90	7.452756E-5	40.27334	8
TACGAGT	145	1.9022991E-8	40.01046	4
TCTAAAG	130	3.6591337E-7	39.04867	3
CTACACC	115	7.084036E-6	37.83598	4
ACGAGTC	155	3.4242476E-8	37.42914	5