H3V73AFX2_n01_plasmid_corrected.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3V73AFX2_n01_plasmid_corrected.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8874429
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATACACGATCTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTAT	1392398	15.690001013022922	No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTATG	1052066	11.855027517826782	No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCAC	979296	11.035031098902252	No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTATG	826331	9.311370906229573	No Hit
GATAGGTCGCATCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTA	722442	8.140715306866504	No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTA	640212	7.214120480314847	No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCA	610678	6.881321603902628	No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACT	578639	6.520295559297392	No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGCCAGTAGGT	552659	6.227544329894352	No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTC	438742	4.943889911114281	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCC	431513	4.862431149091395	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATACACG	147780	143.16052	1
CACGATC	148010	142.76877	4
GATCTCT	148385	142.70903	7
AAGTAGA	111075	142.67557	2
CGATCTC	148320	142.65488	6
AGAGTCT	111285	142.55998	6
ACACGAT	148525	142.521	3
TAGAGTC	111330	142.4506	5
ACGATCT	148585	142.38591	5
TACACGA	148640	142.3817	2
ATCTCTT	149295	142.36484	8
ATCGCGC	68295	142.25262	2
TCTCTTG	149345	142.23521	9
CGCGCGG	68325	142.2266	4
AACAATG	88550	142.19427	2
CGATCGT	104885	142.13596	2
CGTTACC	104770	142.11807	6
TTACCAT	105230	142.07024	8
AGGTCGC	77955	142.05202	4
GATCGCG	68450	142.02644	1