H3V73AFX2_n01_CD4_presort_corrected.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3V73AFX2_n01_CD4_presort_corrected.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11485284
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATACACGATCTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTAT	1338242	11.651797204144016	No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCAC	1229667	10.706457062794442	No Hit
ATACTGTATCTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTAT	1153132	10.0400825961291	No Hit
GATAGGTCGCATCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTA	1016918	8.854095379792088	No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTATG	866031	7.5403533774175715	No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACT	822869	7.164550741627286	No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTATG	788272	6.863321795090134	No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCA	775114	6.748757801722621	No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGCCAGTAGGT	752646	6.553133557689997	No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTA	696561	6.06481302508497	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCC	585423	5.097157371119425	No Hit
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTC	555141	4.8334982400086925	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATACTGT	123160	142.97284	1
CGCGCGG	74715	142.53307	4
ATCTCTT	268180	142.53302	8
ATACACG	143530	142.48244	1
ACTGTAT	123625	142.47372	3
GATCTCT	143895	142.35538	7
AGGTCGC	109050	142.34665	4
TCTCTTG	268270	142.31612	9
CGATCTC	143835	142.19997	6
CGCATCT	109825	142.13316	8
TAGAGTC	84815	142.11551	5
AGAGTCT	84810	142.08992	6
CGTTACC	132365	142.05882	6
CTGTATC	123785	142.05106	4
TCGATTC	83765	142.04187	2
CACGATC	143730	142.0233	4
ACACGAT	144035	142.01752	3
ACGATCT	143930	142.01106	5
AACAATG	93000	141.92764	2
TACTGTA	124145	141.91655	2