H3TN2AFXY_n02_ah7797a-0718.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	H3TN2AFXY_n02_ah7797a-0718.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8973310
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	16601	0.18500419577614058	No Hit

Adapter Content

Adapter graph

Kmer Content

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGGGG	470	0.0	11.966763	16
GGCGGTC	620	0.0	11.608902	38
CCTCGGG	490	0.0	11.019314	15
CCAGGCG	855	0.0	9.208431	35
TCGGGGA	740	0.0	8.816545	17
CCCAGGC	965	0.0	8.62498	34
GCGGTCT	955	0.0	8.007623	39
CAGGCGG	925	0.0	7.7819705	36
GTCTCCC	990	0.0	7.496873	42
TAAGCCG	795	3.092282E-11	7.3576784	16
CTGACCC	785	1.8553692E-10	7.162857	40
CGGTCTC	1025	0.0	7.021696	40
TCCTCGG	1090	0.0	6.604886	14
CCTGACC	795	1.2943929E-8	6.5071187	39
AGGCGGT	1195	1.8189894E-12	6.2116985	37
TCCCAGG	1480	3.6379788E-12	5.4717584	33
GGTCTCC	1370	4.0745363E-10	5.2534294	41
CCAGGGA	1105	3.352343E-7	5.0944524	5