Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content H3TJ5BGXN_n01_R01 H3TJ5BGXN_n01_R01.fastq.gz Conventional base calls Sanger / Illumina 1.9 29.0 0.0 151.0 46.0 100.0 151.0 pass pass warn pass fail fail pass pass pass fail fail H3TJ5BGXN_n01_R01rc H3TJ5BGXN_n01_R01rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn H3TJ5BGXN_n01_R02 H3TJ5BGXN_n01_R02.fastq.gz Conventional base calls Sanger / Illumina 1.9 78.0 0.0 151.0 43.0 93.58974358974359 151.0 pass pass fail pass fail warn pass pass pass fail fail H3TJ5BGXN_n01_R02rc H3TJ5BGXN_n01_R02rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 17.0 0.0 151.0 44.0 100.0 151.0 pass pass pass warn fail fail pass pass pass fail pass H3TJ5BGXN_n01_R03 H3TJ5BGXN_n01_R03.fastq.gz Conventional base calls Sanger / Illumina 1.9 38.0 0.0 151.0 45.0 100.0 151.0 pass pass fail pass fail fail pass pass pass fail fail H3TJ5BGXN_n01_R03rc H3TJ5BGXN_n01_R03rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 7.0 0.0 151.0 44.0 100.0 151.0 pass pass warn fail fail pass pass pass fail fail H3TJ5BGXN_n01_R04 H3TJ5BGXN_n01_R04.fastq.gz Conventional base calls Sanger / Illumina 1.9 32.0 0.0 151.0 47.0 100.0 151.0 pass pass fail pass fail fail pass pass pass fail warn H3TJ5BGXN_n01_R04rc H3TJ5BGXN_n01_R04rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 85.0 0.0 151.0 42.0 88.23529411764706 151.0 pass pass fail warn fail fail pass pass pass fail pass H3TJ5BGXN_n01_R05 H3TJ5BGXN_n01_R05.fastq.gz Conventional base calls Sanger / Illumina 1.9 279.0 0.0 151.0 52.0 84.22939068100358 151.0 pass fail fail pass fail fail pass pass pass fail fail H3TJ5BGXN_n01_R05rc H3TJ5BGXN_n01_R05rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 10.0 0.0 151.0 40.0 90.0 151.0 pass pass pass warn fail fail pass pass pass fail pass H3TJ5BGXN_n01_R06 H3TJ5BGXN_n01_R06.fastq.gz Conventional base calls Sanger / Illumina 1.9 34.0 0.0 151.0 43.0 100.0 151.0 pass pass fail pass fail fail pass pass pass fail fail H3TJ5BGXN_n01_R06rc H3TJ5BGXN_n01_R06rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn H3TJ5BGXN_n01_R07 H3TJ5BGXN_n01_R07.fastq.gz Conventional base calls Sanger / Illumina 1.9 25.0 0.0 151.0 46.0 100.0 151.0 pass pass fail warn fail fail pass pass pass fail pass H3TJ5BGXN_n01_R07rc H3TJ5BGXN_n01_R07rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 1.0 0.0 151.0 41.0 100.0 151.0 pass pass warn fail fail pass pass pass fail pass H3TJ5BGXN_n01_R08 H3TJ5BGXN_n01_R08.fastq.gz Conventional base calls Sanger / Illumina 1.9 27.0 0.0 151.0 45.0 100.0 151.0 pass pass warn pass fail fail pass pass pass fail pass H3TJ5BGXN_n01_R08rc H3TJ5BGXN_n01_R08rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 81.0 0.0 151.0 44.0 85.18518518518519 151.0 pass pass fail pass fail fail pass pass pass fail fail H3TJ5BGXN_n01_R09 H3TJ5BGXN_n01_R09.fastq.gz Conventional base calls Sanger / Illumina 1.9 26.0 0.0 151.0 43.0 100.0 151.0 pass pass warn pass fail warn pass pass pass fail pass H3TJ5BGXN_n01_R09rc H3TJ5BGXN_n01_R09rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 154.0 0.0 151.0 43.0 91.55844155844156 151.0 pass fail fail pass fail fail pass pass pass fail pass H3TJ5BGXN_n01_R10 H3TJ5BGXN_n01_R10.fastq.gz Conventional base calls Sanger / Illumina 1.9 34.0 0.0 151.0 44.0 100.0 151.0 pass pass fail pass fail fail pass pass pass fail fail H3TJ5BGXN_n01_R10rc H3TJ5BGXN_n01_R10rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn H3TJ5BGXN_n01_R11 H3TJ5BGXN_n01_R11.fastq.gz Conventional base calls Sanger / Illumina 1.9 30.0 0.0 151.0 45.0 100.0 151.0 pass pass fail warn fail fail pass pass pass fail fail H3TJ5BGXN_n01_R11rc H3TJ5BGXN_n01_R11rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 4.0 0.0 151.0 45.0 100.0 151.0 pass pass warn fail fail pass pass pass fail fail H3TJ5BGXN_n01_R12 H3TJ5BGXN_n01_R12.fastq.gz Conventional base calls Sanger / Illumina 1.9 53.0 0.0 151.0 43.0 100.0 151.0 pass pass fail pass fail warn pass pass pass fail fail H3TJ5BGXN_n01_R12rc H3TJ5BGXN_n01_R12rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn H3TJ5BGXN_n01_R13_2 H3TJ5BGXN_n01_R13_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 16219444.0 0.0 151.0 45.0 1.7827931872190492 151.0 pass fail fail pass fail warn pass pass fail fail fail H3TJ5BGXN_n01_R13rc H3TJ5BGXN_n01_R13rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 2.0 0.0 151.0 45.0 100.0 151.0 pass pass warn fail warn pass pass pass fail pass H3TJ5BGXN_n01_R14_2 H3TJ5BGXN_n01_R14_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 15717511.0 0.0 151.0 45.0 1.8695786548064512 151.0 pass fail fail pass fail warn pass pass fail fail fail H3TJ5BGXN_n01_R14rc H3TJ5BGXN_n01_R14rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn H3TJ5BGXN_n01_R15_2 H3TJ5BGXN_n01_R15_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 11513997.0 0.0 151.0 44.0 2.613515168857847 151.0 pass fail fail pass fail warn pass pass fail fail fail H3TJ5BGXN_n01_R15rc H3TJ5BGXN_n01_R15rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 1.0 0.0 151.0 50.0 100.0 151.0 pass pass warn fail fail pass pass pass fail pass H3TJ5BGXN_n01_R16_2 H3TJ5BGXN_n01_R16_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 14137207.0 0.0 151.0 43.0 2.0713319151178267 151.0 pass fail fail pass fail warn pass pass fail fail fail H3TJ5BGXN_n01_R16rc H3TJ5BGXN_n01_R16rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 4.0 0.0 151.0 41.0 100.0 151.0 pass pass pass fail fail pass pass pass fail pass H3TJ5BGXN_n01_R17_2 H3TJ5BGXN_n01_R17_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 9741540.0 0.0 151.0 43.0 2.69813035382131 151.0 pass fail fail pass fail warn pass pass fail fail fail H3TJ5BGXN_n01_R17rc H3TJ5BGXN_n01_R17rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn H3TJ5BGXN_n01_R18_2 H3TJ5BGXN_n01_R18_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 10972397.0 0.0 151.0 43.0 2.566628800359995 151.0 pass fail fail pass fail warn pass pass fail fail fail H3TJ5BGXN_n01_R18rc H3TJ5BGXN_n01_R18rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 4.0 0.0 151.0 45.0 100.0 151.0 pass pass warn fail fail pass pass pass fail fail H3TJ5BGXN_n01_R19_2 H3TJ5BGXN_n01_R19_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 14097689.0 0.0 151.0 45.0 2.2668537570711402 151.0 pass warn warn pass fail warn pass pass fail fail warn H3TJ5BGXN_n01_R19rc H3TJ5BGXN_n01_R19rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 3.0 0.0 151.0 40.0 100.0 151.0 pass pass warn fail warn pass pass pass fail pass H3TJ5BGXN_n01_R20_2 H3TJ5BGXN_n01_R20_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 14476247.0 0.0 151.0 45.0 2.201947945514696 151.0 pass warn warn pass fail warn pass pass fail fail pass H3TJ5BGXN_n01_R20rc H3TJ5BGXN_n01_R20rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn H3TJ5BGXN_n01_R21_2 H3TJ5BGXN_n01_R21_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 14330402.0 0.0 151.0 45.0 2.194654041406743 151.0 pass warn warn pass fail warn pass pass fail fail pass H3TJ5BGXN_n01_R21rc H3TJ5BGXN_n01_R21rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn H3TJ5BGXN_n01_R22_2 H3TJ5BGXN_n01_R22_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 62.0 0.0 151.0 44.0 88.70967741935483 151.0 pass pass fail warn fail fail pass pass pass fail warn H3TJ5BGXN_n01_R22rc H3TJ5BGXN_n01_R22rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn H3TJ5BGXN_n01_R23_2 H3TJ5BGXN_n01_R23_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 1.0 0.0 151.0 46.0 100.0 151.0 pass pass pass fail fail pass pass pass fail fail H3TJ5BGXN_n01_R23rc H3TJ5BGXN_n01_R23rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn H3TJ5BGXN_n01_R24_2 H3TJ5BGXN_n01_R24_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 4.0 0.0 151.0 47.0 100.0 151.0 pass pass pass fail fail pass pass pass fail fail H3TJ5BGXN_n01_R24rc H3TJ5BGXN_n01_R24rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn H3TJ5BGXN_n01_undetermined H3TJ5BGXN_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 35475298.0 0.0 151.0 88.0 1.8975148789683791 151.0 pass fail fail pass fail fail pass pass fail fail pass