FastQCFastQC Report
Mon 21 Nov 2022
H3TJ5BGXN_n01_R12.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3TJ5BGXN_n01_R12.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAGTACACTCTTCACGAAAGGACGAAACACCTGGAATGATTGCTTGACA11.8867924528301887No Hit
CTACACCATCTCAAGACGAAAGGACGAAACACAGAGGTTGCCCAGCCCAC11.8867924528301887No Hit
GATAGCTCCGTTCTACAGGAAAGGACGAAACAACGGAGACGGACGTCTCA11.8867924528301887No Hit
TAAGTAAACTCTTCACCAAAGGACGAAACACCTCCAAGTCGCACGCTTCC11.8867924528301887No Hit
GATCGCTCCGTTCTACTGGAAAGGACGAAACAACGCAAACGAGGTGAGCC11.8867924528301887No Hit
GATAGCACCGTTCTACAGGAAAGGACGAAACAACGAATTGTGGCGGACAC11.8867924528301887No Hit
ATAAACAAACTCTACTCGAAAGGACGAAACACAGCGCTACGCCTCCCTGA11.8867924528301887No Hit
TAAGTACAGTCTTCTGCAAAGGACGAAACACCTGGGAAAGCCTCATCTAC11.8867924528301887No Hit
TAAGTAGACTCTTCAGGAAAGGACGAAACACCGAGGCAATTTCAGGATAT11.8867924528301887No Hit
TAAGTAAACTCTTCACCAAAGGACGAAACACCGCACTTTAATGAGTGTCC11.8867924528301887No Hit
GATAGCTCCGTTCTACTGGAAAGGACGAAACGCCGAGAGCCTTTGTGGAC11.8867924528301887No Hit
TAATTACACTCTTCACCAAAGGACGAAACACCTCAACAAAACAATCTGAC11.8867924528301887No Hit
GATAGCTCCGTTCTTCTGGAAAGGACGAAACACCGCAATTCGTACGATTC11.8867924528301887No Hit
ATAAACGATCTCTACACGAAAGGACGAAACACAGTGCAGAGGAGTGGGAA11.8867924528301887No Hit
GATAGCACCGTTCTACAGGAAAGGACGAAACACCGGATCATTGACACCTA11.8867924528301887No Hit
GATAGCTCCGTTCTAGAGGAAAGGACGAAACACCGATGTAGACAGATAGA11.8867924528301887No Hit
ATAAACGAACTCTTGACGAAAGGACGAAACACCGAGCATACTACACCACA11.8867924528301887No Hit
TAAGTAGAGTCTTCTGGAAAGTACGAAACACCGAGGACTTGGGCTCCACG11.8867924528301887No Hit
TAAGTAGACTCTTCACCAAAGGACGAAACACCTGAAAGTCGACTTTCCAC11.8867924528301887No Hit
TAAGTAGACTCTTCAGGAAAGGACGAAACACCTGGCAATTCTCCTCCCTC11.8867924528301887No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCGTCACACTGTCTCCTTTA11.8867924528301887No Hit
ATAATCTATCTCTACTGGAAAGGACGAAACACCGACACAAACGAGTTCAT11.8867924528301887No Hit
CTACACAAACTCTAGTCGAAAGGACGAAACACCGCTAAGACTAAGACTGC11.8867924528301887No Hit
TAAGTAAACTCTTCAGCAAAGGACGAAACACCGATTATACACCAGAGGAC11.8867924528301887No Hit
GATCGCCCGGTTCTTCAGGAAAGGACGAAACACCGCTACGACTGATGCTC11.8867924528301887No Hit
TAAGTAGACTCTTCAGGAAAGGACGAAACACCGGGCATGCTCCCTCATAC11.8867924528301887No Hit
GATAGCTCCGTTCTTCAGGAAAGGACGAAACAACGGCAAGCATGACCTCC11.8867924528301887No Hit
GATAGCACCGTTCAACAGGAAAGGACGAAACAACGGTAAGGATGCTCCTT11.8867924528301887No Hit
GATAGCTCCGTTCAACTGGAAAGGACGAAACAACGGACTGAAATGGAGAC11.8867924528301887No Hit
GATAGCACCGTTCTACAGGAAAGGACGAAACAACGGCACTCGTTGGAAGA11.8867924528301887No Hit
TAAGTAAAGTCTTCTCGAAAGGACGAAACACCGCTAGTGACTGAGTAGCC11.8867924528301887No Hit
TAAGTACACTCTTCAGCAGAGTACGAAACACCGAAGAGACACACAGCAGA11.8867924528301887No Hit
TAATTAGACTCTTCACCAAAGGACGAAACACCGAAGCAAGCGGCCTTCAC11.8867924528301887No Hit
TTAAACTAACTCTACACGAAAGGACGAAACACAGGGAGATTCATTCCTGA11.8867924528301887No Hit
CTAAACCAACTCTACAGGAAAGGACGAAACACAGGAAAAGTCACAAAAAG11.8867924528301887No Hit
TAAGTAGACTCTTCACCAAAGGACGAAACACCGGGAGAGAAGCGCGTCGG11.8867924528301887No Hit
TAAGTATACTCTTCACCAAAGGACGAAACACCGATTAAAGCCTTGGCTAA11.8867924528301887No Hit
GATCGCACCGTTCTTGTGGAAAGGACGAAACAACGACAAATGTACTTACC11.8867924528301887No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCGCAGATTATGCACAGGAT11.8867924528301887No Hit
GATAGCTCCGTTCTACAGGAAAGGACGAAACAACGAGTCAACCCAGTCAA11.8867924528301887No Hit
GATAGCTCCGTTCTCGAGGAAAGGACGAAACAACAACCACAGCAGCTGCA11.8867924528301887No Hit
TAAGTAGACTCTTCTCCAAAGGACGAAACACCGCAAGAAGGTCCAGCGCA11.8867924528301887No Hit
GATAGCTCCGTTCTTGAGGAAAGGACGAAACACCGACTTCAAGTCTCGAA11.8867924528301887No Hit
CTAAACTATCTCTACACGAAAGGACGAAACACAGGCAGTGACTCGATTCA11.8867924528301887No Hit
GATAGCACCGTTCTACAGGAAAGGACGAAACACCGGCACGCCTCGCCCAA11.8867924528301887No Hit
GATAGCTCCGTTCTAGAGGAAAGGACGAAACACCGGCAGTATTCGAAGAA11.8867924528301887No Hit
ATACACCAACTCTACACGAAAGGACGAAACACAGCATAGTATGAAGGAAA11.8867924528301887No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGGGAGGACGAAGCAGGTC11.8867924528301887No Hit
GATAGCGCGGTTCTTGTGGAAGGGACGAAACAACGCCAGTAGGGGTCGAC11.8867924528301887No Hit
GATAGCTCCGTTCTAGAGGAAAGGACGAAACACCGCAGACTGGACTACCA11.8867924528301887No Hit
ATAAACGATCTCTACACGAAAGGACGAAACACAGCATTAGGTACTCGTAG11.8867924528301887No Hit
TAAGTAGACTCTTCAGGAAAGGACGAAACACCGTGCCATGTGCATGACGC11.8867924528301887No Hit
GATAGCACCGTTCTACTGGAAAGGACGAAACAACGTGGTTGAAGGCCTAG11.8867924528301887No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)