FastQCFastQC Report
Mon 21 Nov 2022
H3TJ5BGXN_n01_R09rc.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3TJ5BGXN_n01_R09rc.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences154
Sequences flagged as poor quality0
Sequence length151
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAAACAATCTCTACACGAAAGGACGAAACACAGAACAACTACCAACTCC31.948051948051948No Hit
ATAAACTAACTCTACACGAAAGGACGAAACACAGAACAACTACCAACTCC31.948051948051948No Hit
ATAAACAAACTCTACACGAAAGGACGAAACACAGAACAACTACCAACTCC31.948051948051948No Hit
GATAGCACCGTTCTACAGGAAAGGACGAAACAACGAACACCTACCAACAC21.2987012987012987No Hit
GATAGCTCCGTTCTACAGGAAAGGACGAAACACCGAAAACCTACCAACTC21.2987012987012987No Hit
ATAAACGAACTCTACACGAAAGGACGAAACACAGAACAACTACCAACTCC21.2987012987012987No Hit
ATAAACTATCTCTACACGAAAGGACGAAACACAGAACAACTACCAACTCC21.2987012987012987No Hit
ATAAACAATCTCTACACGAAAGGACGAAACACAGAACAACTACCAACTCC21.2987012987012987No Hit
ATAAACAAACTCTACACGAAAGGACGAAACACAGAACACCTACCAACTCC21.2987012987012987No Hit
ATAAACCAACTCTTCTCGAAAGGACGAAACACAGAACAACTACCAACTCC21.2987012987012987No Hit
ATAAACTATCTCTAGTCGAAACGACGAAACAAAGAACACCTACCAACTCC10.6493506493506493No Hit
GATAGCTCCGTTCAACAGGAAAGGACGAAACAACGAAACCCTACCAACTC10.6493506493506493No Hit
GATAGCTCGGTTCTAGAGGAAAGGACGAAACAACGAACACCTACCAACAC10.6493506493506493No Hit
GATAGCACCGTTCTTGAGGAAAGGACGAAACACCGAACACCTACCAACAC10.6493506493506493No Hit
ATAAACGATCTCTACACGAAAGGACGAAACACAGAACCACTACCAACTCC10.6493506493506493No Hit
ATAAACAAACTCTAGACGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
ATAAACTATCTCTAGTGGAAAGGACGAAACACAGAACACCTACCAACTCA10.6493506493506493No Hit
ATAAACAATCTCTAGTCGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
ATACACTAACTCTACACGAAAGGACGAAACACAGAACACCTACCAACTCC10.6493506493506493No Hit
CTAAACTAACTCTACACGAAAGGACGAAACACAGAACCACTACCAACTCC10.6493506493506493No Hit
CCAAACTAACTCTACAGGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
ATACACTATCTCTAGAGGAAAGGACGAAACACAGAACAACTACTAACTCC10.6493506493506493No Hit
GATCGCTCCGTTCTTCAGGAAAGGACGAAACAACGAACCCCTACCAACTC10.6493506493506493No Hit
CTAAACTAACTCTACACGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
ATAAACAAACTCTACACGAAAGGACGAAACACAGAACCCCTACCAACTCC10.6493506493506493No Hit
CTAAACTAACTCTTCAGGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
GATCGCACCGTTCTAGAGGAAAGGACGAAACAACGAAAACCTACCAACAC10.6493506493506493No Hit
ATACACCAACTCTACACGAAAGGACGAAAAAAAGAAAAACAAACAACAAC10.6493506493506493No Hit
GGGAGCACCCTACATCAGGAAAGGACCAAACAAGCAAACCGTCCCACTCC10.6493506493506493No Hit
GATAGCTCCGTTCTACAGGAAAGGACGAAACACCGAACACCTACCAACTC10.6493506493506493No Hit
CTAAACGAACTCTACACGAAAGGACGAAACACAGAACCACTACCAACTCC10.6493506493506493No Hit
ATAAACGAACTCTTCTGGAAAGGACGAAACACAGAACACCTACCAACTCC10.6493506493506493No Hit
CTAAACTAACTCTAGACGAAAGGACGAAACACAGAACACCTACCAACTCC10.6493506493506493No Hit
GATAGCGCCGTTCTACTGGAAAGGACGAAACAACGAACCCCTACCAACTC10.6493506493506493No Hit
CCCAACGATCTCTACTCGAAAGGACGAAACACAGAACACCTACCAACTCC10.6493506493506493No Hit
CTCAACAAACTCTACTGGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
GATCGCTCGGTTCATCAGGAAAGGACGAAACAACGAACACCTACCAACAC10.6493506493506493No Hit
GATACCGCGGTTCTACAGGAAAGGACGAAACACCGAACACCTACCAACAC10.6493506493506493No Hit
GATAGCACCGTTCAACAGGAAAGGACGAAACACCGAACACCTACCAACAC10.6493506493506493No Hit
ATACACCAACTCTACTGGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
ATAAACAAACTCTAGTCGAAAGGACGAAACACAGAACAACTACCAACTGC10.6493506493506493No Hit
ATAAACAAACTCTTCTCGAAAGGACGAAACACAGAACACCTACCAACTCG10.6493506493506493No Hit
ATACACTATCTCTACACGAAAGGACGAAACACAGAACACCTACCAACTGC10.6493506493506493No Hit
GATAGCGCCGTTCTACTGGAAAGGACGAAACACCGAAAACCTACCAACAC10.6493506493506493No Hit
GATAGCTCGGTTCTTCTGGAAAGGACGAAACAACGAACCCCTACCAACTC10.6493506493506493No Hit
CCCAACAAACTCTACACGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
ATAAACGAACTCTAGAGGAAAGGACGAAACACAGAACAACTACCAACTGC10.6493506493506493No Hit
ATACACGAACTCTAGACGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
ATACACGATCTCTAGTGGAAAGGACGAAACACAGAACAACTACCAACTGC10.6493506493506493No Hit
ATACACGATCTCTACTCGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
GATCGCCCGGTTCAACAGGAAAGGACGAAACACCGAACACCTACCAACAC10.6493506493506493No Hit
ATACACGAACTCTTCTCGAAAGGACGAAACACAGAACAACTACCAACTCG10.6493506493506493No Hit
ATAAACAAACTCTACTCGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
GATCGCGCGGTTCTACAGGAAAGGACGAAACAACGAACCCCTACCAACTC10.6493506493506493No Hit
CCCACCCTACTCTACACGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
CTAAACAATCTCTACACGAAAGGACGAAACACAGAACACCTACCAACTCC10.6493506493506493No Hit
GATAGCCCGGTTCTTCAGGAAAGGACGAAACAACGAACACCTACCAACTC10.6493506493506493No Hit
GATCGCCCGGTTCTTCTGGAAAGGACGAAACAACGAACACCTACCAACAC10.6493506493506493No Hit
GATAGCGCGGTTCTTGAGGAAAGGACGAAACAAGGAACACCTAGCAACTC10.6493506493506493No Hit
GATAGCCCGGTTCATCTGGAAAGGACGAAACACCGAAAACCTACCAACTC10.6493506493506493No Hit
ATAAACTAACTCTACACGAAAGGACGAAACACAGAACAACTACCAACTCG10.6493506493506493No Hit
GATAGCACCGTTCTACAGGAAAGGACGAAACACCGAAAACCTACCAACTC10.6493506493506493No Hit
GATAGCTCCGTTCAAGAGGAAAGGACGAAACACCGAACACCTACCAACTC10.6493506493506493No Hit
GATAGCGCGGTTCTTGAGGAAAGGACGAAACACCGAACACCTACCAACTC10.6493506493506493No Hit
ATAAACCAACTCTACAGGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
GATAGCGCCGTTCTAGAGGAAAGGACGAAACAACGAAACCCTACCAACTC10.6493506493506493No Hit
ATAAACGATCTCTTCTGGAAAGGACGAAACACAGAACCACTACCAACTGC10.6493506493506493No Hit
ATACACTAACTCTTCAGGAAAGGACGAAACACAGAACAACTACCAACTGG10.6493506493506493No Hit
CTACACCATCTCTTGAGGAAAGGACGAAACACAGAACACCTACCAACTGC10.6493506493506493No Hit
GATAGCGCGGTTCTTGTGGAAAGGACGAAACAACGAAAACCTACCAACAC10.6493506493506493No Hit
ATAAACAAACTCTACTCGAAAGGACGAAACACAGAACACCTACCAACTCC10.6493506493506493No Hit
GATAGCTCCGTTCTAGAGGAAAGGACGAAACACCGAAAACCTACCAACTC10.6493506493506493No Hit
GATAGCACGGTTCTAGTGGAAAGGACGAAACACCGAACACCTACCAACAC10.6493506493506493No Hit
CTAAACGAACTCTTGTGGAAAGGACGAAACACAGAACAACTACCAACTGC10.6493506493506493No Hit
CCCCCCTTACTCTAGACGAAAGGACGAAACACAGAACAACTTCCAACTGC10.6493506493506493No Hit
ATACACGAACTCTAGTCGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
GATAGCTCCGTTCTAGAGGAAAGGACGAAACACCGAACACCTACCAACTC10.6493506493506493No Hit
ATAAACAAACTCTACAGGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
GATAGCTCCGTTCAACAGGAAAGGACGAAACACCGAAAACCTACCAACAC10.6493506493506493No Hit
CTCAACGAACTCTTCACGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
ATACACGATCTCTAGACGAAAGGACGAAACACAGAACACCTACCAACTCC10.6493506493506493No Hit
CTAAACAAACTCTACAGGAAAGGACGAAACACCGAACAACTACCAACTCC10.6493506493506493No Hit
GATAGCTCCGTTCAACTGGAAAGGACGAAACAACGAACACCTACCAACTC10.6493506493506493No Hit
CTAAACAAACTCTACACGAAAGGACGAAACACCGAACAACTACCAACTCC10.6493506493506493No Hit
GATAGCACCGTTCAAGAGGAAAGGACGAAACACCGAACACCTACCAACAC10.6493506493506493No Hit
GATAGCTCCGTTCAACAGGAAAGGACGAAACACCGAACACCTACCAACAC10.6493506493506493No Hit
GCGAGCTCGGTTCTTGTGGAAAGGACGAAACAACGAACACCTACCAACTC10.6493506493506493No Hit
ATACACTATCTCTACTGGAAAGGACGAAACACAGAACCCCTACCAACTGC10.6493506493506493No Hit
ATAAACAAACTCTACTCGAAAGGACGAAACACAGAACAACTACCAACTAC10.6493506493506493No Hit
GATAGCTCCGTTCTAGAGGAAAGGACGAAACAACGAACACCTACCAACTC10.6493506493506493No Hit
GATAGCACGGTTCAACAGGAAAGGACGAAACAACGAAACCCTACCAACTC10.6493506493506493No Hit
ATACACTATCTCTAGACGAAAGGACGAAACACAGAACAACTACCAACTGC10.6493506493506493No Hit
ATAAACGAACTCTTCTCGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
ATAAACTAACTCTACACGAAAGGACGAAACACAGAACCCCTACCAACTCC10.6493506493506493No Hit
ATAAACGAACTCTACAGGAAAGGACGAAACACAGAACACCTACCAACTCC10.6493506493506493No Hit
GATAGCACCGTTCAACAGGAAAGGACGAAACACCGAACCCCTACCAACTC10.6493506493506493No Hit
GATAGCACCGTTCATCCGAAAGGACGAAACACAGAACACCTACCAACTCC10.6493506493506493No Hit
GATAGCGCGGTTCTTGAGGAAAGGACGAAACACCGAACCGCTACCAACTC10.6493506493506493No Hit
GATCGCGCCGTTCTTGTGGAAAGGACGAAACAACGAACACCTACCAACTC10.6493506493506493No Hit
ATAAACTATCTCTACTCGAAAGGACGAAACACAGAACAACTACCAACTGC10.6493506493506493No Hit
GATAGCACGGTTCTACAGGAAAGGACGAAACACCGAAACCCTACCAACTC10.6493506493506493No Hit
GATCGCGCCGTTCAACAGGAAAGGACGAAACACCGAAAACCTACCAACTC10.6493506493506493No Hit
GATAGCTCCGTTCTTGAGGAAAGGACGAAACAACGAAAACCTACCAACTC10.6493506493506493No Hit
GATAGCTCCGTTCTACAGGAAAGGACGAAACAACGAAAACCTACCAACTC10.6493506493506493No Hit
GATAGCTCGATTCTTCAGGAAAGGACGAAACAACGAACACCTACCAACTC10.6493506493506493No Hit
GATAGCTCGGTTCTACAGGAAAGGACGAAACACCGAAAACCTACCAACTC10.6493506493506493No Hit
ATACACTAACTCTTCACGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
CTCAACAAACTCTACACGAAAGGACGAAACACCGAACAACTACCAACTCC10.6493506493506493No Hit
CTACACAATCTCTAGACGAAAGGACGAAACACCGAACACCTACCAACTCC10.6493506493506493No Hit
ATACACGAACTCTACACGAAAGGACGAAACACAGAACCACTACCAACTCC10.6493506493506493No Hit
GATAGCTCCGTTCTTCAGGAAAGGACGAAACACCGAACACCTACCAACTC10.6493506493506493No Hit
ATACACGAACTCTACACGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
GATAGCTCCGTTCTTGAGGAAAGGACGAAACAACGAACACCTACCAACTC10.6493506493506493No Hit
ATACACGATCTCTAGTGGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
ATACACGATCTCTAGAGGAAAGGACGAAACACCGAACAACTACCAACTCC10.6493506493506493No Hit
GATAGCACGGTTCTACAGGAAAGGACGAAACAACGAACCCCTACCAACAC10.6493506493506493No Hit
ATAAACCAACTCTACACGAAAGGACGAAACACAGAACACCTACCAACTGC10.6493506493506493No Hit
GATAGCTCGGTTCTACAGGAAAGGACGAAACAACGAACACCTACCAACTC10.6493506493506493No Hit
GATAGCTCCGTTCTTCAGGAAAGGACGAAACACCGAAAACCTACCAACTC10.6493506493506493No Hit
ATACACGATCTCTAGTGGAAAGGACGAAACACAGAACCACTACCAACTCC10.6493506493506493No Hit
CCCCACGATCTCTACTGGAAAGGACGAAACACAGAACCACTACCAACTAC10.6493506493506493No Hit
ATACACGATCTCTAGTCGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
ATAAACGATCTCTACTCGAAAGGACGAAACACAGAACACCTACCAACTCC10.6493506493506493No Hit
CTCAACGATCTCTAGACGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
ATACACTAACTCTACACGAAAGGACGAAACACAGAACCACTACCAACTCC10.6493506493506493No Hit
CTAAACCATCTCTACACGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
ATAAACAAACTCTACAGGAAAGGACGAAACACAGAACACCTACCAACTCC10.6493506493506493No Hit
ATAAACCAACTCTAGAGGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
GATAGCTCCGTTCTTCAGGAAAGGACGAAACACCGAACCCCTACCAACTC10.6493506493506493No Hit
CTCCACCAACTCTACACGAAAGGACGAAACACAGAACACCTACCAACTCC10.6493506493506493No Hit
GATAGCTCGGTTCAACAGGAAAGGACGAAACACCGAACCCCTACCAACAC10.6493506493506493No Hit
ATAAACCAACTCTACTCGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
CTAAACAATCTCTAGAGGAAAAGACGAAACACAGAACACCTACCAACTCC10.6493506493506493No Hit
ATAAACTAACTCTACTCGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
CTAAACAAACTCTAGACGAAAGGACGAAACACAGAACCACTACCAACTCC10.6493506493506493No Hit
ATAAACAAACTCTTCAGGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
GATAGCACGGTTCTACTGGAAAGGACGAAACACCGAAAACCTACCAACAC10.6493506493506493No Hit
ATAAACAAACTCTACACGAAAGGACGAAACACAGAACCACTACCAACTCC10.6493506493506493No Hit
GATAGCTCCGTTCTTGTGGAAAGGACGAAACACCGAACACCTACCAACTC10.6493506493506493No Hit
ATAAACTAACTCTAGAGGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit
ATACACGATCTCTACACGAAAGGACGAAACACAGAACAACTACCAACTCC10.6493506493506493No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)