FastQCFastQC Report
Mon 21 Nov 2022
H3TJ5BGXN_n01_R09.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3TJ5BGXN_n01_R09.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATAGCTCCGTTCTACAGGAAAGGACGAAACAACGACTAGACCTCGCGGC13.8461538461538463No Hit
TAAGTAGAGTCTTCACGAAAGGACGAAACACCGCCACTAGGTACAGCTTC13.8461538461538463No Hit
GATAGCACGGTTCTTGAGGAAAGGACGAAACACCGACTTTACATCATGTC13.8461538461538463No Hit
ATACACGAACTCTACTGGAAAGGACGAAACACAGAGAAGGCAACCAGCTC13.8461538461538463No Hit
TAAGTACACTCTTCACGAAAGGACGAAACGCCGGCGTTTCCAACCTTCAC13.8461538461538463No Hit
GATAGCGCCGTTCTACAGGAAAGGACGAAACACCGACAAAGAGTACATAA13.8461538461538463No Hit
TAAGTAAACTCTTCACCAAAGGACGAAACACCGACGAGAGTCAGCGATCG13.8461538461538463No Hit
TAAGTAGAGTCTTCACCAAAGGACGAAACACCGAGATTAAAATATTCTGA13.8461538461538463No Hit
GATAGCACCGTTCTACAGGAAAGGACGAACCACCGAATCCCAGACAACAC13.8461538461538463No Hit
GATAGCCCGGTTCTTCTGGAAAGGACGAAACACCGCTCTGTCAGAGATGC13.8461538461538463No Hit
GATAGCACGGTTCTACAGGAAAGGACGAAACAACAACATGCCTGAAGCGA13.8461538461538463No Hit
ATAAACAAACTCTACACGAAAGGACGAAACACCGGACTACCCACATTCCT13.8461538461538463No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCGACAGCTCCTGCCATGAA13.8461538461538463No Hit
ATAAACAAACTCTAGACGAAAGGACAAAACACAGGAGTGCCCCTAAGAGC13.8461538461538463No Hit
TAAGTAGAGTCTTCAGCAAAGGACGAAACACCTGGTTAAGTCCCGGATAA13.8461538461538463No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCGCCCCAGCCCCACCATCT13.8461538461538463No Hit
TAATTACAGTCTTCTGCAAAGGACGAAACACCGCCAGGTACTCGCGTAGC13.8461538461538463No Hit
ATACACGATCTCTACACGAAAGGACGAAACACAGCTGCAATAGCGACACG13.8461538461538463No Hit
TAAGTACAGTCTTCTGGAAAGGACGAAACACCGCTCTTGAAGAAGGTACA13.8461538461538463No Hit
GATAGCACCGTTCTACAGGAAAGGACGAAACAACGATAGCGCTAGGAGCG13.8461538461538463No Hit
ATAAACAAACTCTACACGAAAGGACGAAACACAGCGCTACGAGAGGACAG13.8461538461538463No Hit
GATAGCACGGTTCTACAGGAAAGGACGAAACAACGAATGAATCAAAGCCA13.8461538461538463No Hit
ATACACGATCTCTACAGGAAAGGACGAAACACAGAGCCACTCGTGAAACG13.8461538461538463No Hit
ATACACCAACTCTACACGAAAGGACGAAACACAGAGGATGGGGCAAAGCG13.8461538461538463No Hit
ATACACAATCTCTTCACGAAATGACGAAACACAGCCACATGATGCAGCAT13.8461538461538463No Hit
TAAGTACACTCTTCACCAAAGGACGAAACACCGATGTGTCCGAAGGACGC13.8461538461538463No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)