FastQCFastQC Report
Mon 21 Nov 2022
H3TJ5BGXN_n01_R08.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3TJ5BGXN_n01_R08.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAGTAGAGTCTTGAGGAAAGGACGAAACACCGATTGACGCCACACTCAC13.7037037037037033No Hit
GATAGCTCGGTTCTTACGAAAGGACGAAACACAGGATGGAGGTCCGTGAA13.7037037037037033No Hit
TAAGTAGAGTCTTCTGCAAAGGACGAAACACCGCGACGACCTTGGATTGG13.7037037037037033No Hit
ATAAACGATCTCTACTGGAAAGGACGAAACACAGCCAGACCGGTCCCCAG13.7037037037037033No Hit
GATAGCACCGTTCAACAGGAAAGGACGAAACAACGCAGCCGAAGTCGTCT13.7037037037037033No Hit
ATACACGATCTCTAGTGGAAAGGACGAAACACAGTATTATCTTAGTGTCG13.7037037037037033No Hit
ATAAACAAACTCTAGACGAAAGGACGAAATACAGAACTCGGCCAGGGTGC13.7037037037037033No Hit
GATCGCGCGGTTCTAGAGGAAAGGACGAAACAACGGAGGTGGGTGCGTAC13.7037037037037033No Hit
ATAAACAAACTCTTCTCGAAAGGACGAAACACAGTCCGATTAAGGAGTAA13.7037037037037033No Hit
TAAGTATAGTCTTCAGGAAAGGACGAAACACCGCTGATACCTGAGCATAC13.7037037037037033No Hit
GATAGCGCGGTTCTTGTGGAAAGGACGAAACACCGCGAGATCGAGGCATC13.7037037037037033No Hit
ATACACGATCTCTACTCGAAAGGACGAAACACAAGAGTGTTGTATCTGCA13.7037037037037033No Hit
GATAGCGCGGTTCTAGTGGAAAGGACGAAACAACGCAGCTTCTTGTCGTA13.7037037037037033No Hit
GATCGCACCGTTCAAGAGGAAAGGACGAAACAACGCTAACGCTTGTCTCT13.7037037037037033No Hit
GATAGCTCCGTTCTAGAGGAAAGGACGAAACACCGATTTATTGCCAGGCA13.7037037037037033No Hit
GATAGCGCCGTTCTAGAGGAAAGGACGAAACACCGAGTGCCACAACCACC13.7037037037037033No Hit
TAATTACACTCTTCACCAAAGGACGAAACACCGCATCTGAGCAGCGCTCA13.7037037037037033No Hit
GGCAACAAACTCTAGACGAAAGGACGAAACACAAGCTTGGAAGCGCATCA13.7037037037037033No Hit
ATAAACAATCTCTACACGAAAGGACGAAACACCGTACTGGCCGATACGAG13.7037037037037033No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGGCTACCGTAGACGCC13.7037037037037033No Hit
ATACACTATCTCTACTGGAAAGGACGAAACACAAGCTGGGAAGCGCACGG13.7037037037037033No Hit
ATACACAATCTCTACACGAAAGGACGAAACACAGGCAAGCATGACCTCCT13.7037037037037033No Hit
ATACACAAACTCTTCACGAAAGGACGAAACACAGTACAAAAGACCAAGGC13.7037037037037033No Hit
GATAGCTCGGTTCTTCAGGAAAGGACGAAACAACGAGATCCGGTGGCTCA13.7037037037037033No Hit
CTACACGAACTCTACTGGAAAGGACGAAACACAGGCATACGCACAAAGGC13.7037037037037033No Hit
GATAGCTCCGTTCAACAGGAAAGGACGAAACACCGCAAAGGACCTGCGGC13.7037037037037033No Hit
GATAGCCCGGTTCTACAGGAAAGGACGAAACATCGACAGGAGGAGAACCC13.7037037037037033No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)